Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ABALON-201ENST00000629058 1903 ntBASIC22.06■■□□□ 1.12
RFX7Q2KHR2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 PHGDH-209ENST00000641074 1780 ntBASIC22.06■■□□□ 1.12
RFX7Q2KHR2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 NUS1P1-201ENST00000446295 882 ntBASIC22.06■■□□□ 1.12
RFX7Q2KHR2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 AC005332.3-201ENST00000589904 676 ntBASIC22.06■■□□□ 1.12
RFX7Q2KHR2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 KRT18P1-202ENST00000452408 1331 ntBASIC22.06■■□□□ 1.12
RFX7Q2KHR2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 AC135776.1-201ENST00000319817 2481 ntBASIC22.05■■□□□ 1.12
RFX7Q2KHR2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 IGHGP-201ENST00000390555 1178 ntBASIC22.05■■□□□ 1.12
RFX7Q2KHR2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 TOB2P1-201ENST00000469761 992 ntBASIC22.05■■□□□ 1.12
RFX7Q2KHR2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 GPR32P1-201ENST00000601788 811 ntBASIC22.05■■□□□ 1.12
RFX7Q2KHR2 IFNL4P1-201ENST00000607083 540 ntBASIC22.05■■□□□ 1.12
RFX7Q2KHR2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RFX7Q2KHR2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFX7Q2KHR2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 TSPY19P-201ENST00000418461 509 ntBASIC22.03■■□□□ 1.12
RFX7Q2KHR2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 TSPY18P-201ENST00000441642 509 ntBASIC22.03■■□□□ 1.12
RFX7Q2KHR2 LINC00265-3P-201ENST00000447588 903 ntBASIC22.03■■□□□ 1.12
RFX7Q2KHR2 AP003733.1-201ENST00000491725 852 ntBASIC22.03■■□□□ 1.12
RFX7Q2KHR2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 AC012615.1-201ENST00000565797 1299 ntBASIC22.03■■□□□ 1.12
RFX7Q2KHR2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 AL732292.2-201ENST00000609649 430 ntBASIC22.03■■□□□ 1.12
RFX7Q2KHR2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFX7Q2KHR2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms