Protein–RNA interactions for Protein: Q0VFZ6

CCDC173, Coiled-coil domain-containing protein 173, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC173Q0VFZ6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 AC105020.1-201ENST00000435356 2205 ntBASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC173Q0VFZ6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 DOC2GP-204ENST00000639052 2548 ntBASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 SLC29A4P1-201ENST00000398760 971 ntBASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 TSPY23P-201ENST00000440136 739 ntBASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCDC173Q0VFZ6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCDC173Q0VFZ6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 AC005181.1-201ENST00000604782 1256 ntBASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 AL596257.1-201ENST00000641463 2694 ntBASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC173Q0VFZ6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms