Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
HSPG2P98160 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.26□□□□□ -0.61
HSPG2P98160 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC11.26□□□□□ -0.61
HSPG2P98160 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.26□□□□□ -0.61
HSPG2P98160 SNX12-206ENST00000622259 661 ntTSL 5 BASIC11.26□□□□□ -0.61
HSPG2P98160 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 AL022326.1-202ENST00000641533 845 ntBASIC11.26□□□□□ -0.61
HSPG2P98160 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
HSPG2P98160 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
HSPG2P98160 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
HSPG2P98160 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.25□□□□□ -0.61
HSPG2P98160 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 RHOQP3-201ENST00000437982 621 ntBASIC11.25□□□□□ -0.61
HSPG2P98160 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.25□□□□□ -0.61
HSPG2P98160 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 UROS-202ENST00000368778 1556 ntTSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
HSPG2P98160 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.25□□□□□ -0.61
HSPG2P98160 AC010507.1-201ENST00000633895 436 ntBASIC11.25□□□□□ -0.61
HSPG2P98160 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.25□□□□□ -0.61
HSPG2P98160 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.24□□□□□ -0.61
HSPG2P98160 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.24□□□□□ -0.61
HSPG2P98160 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
HSPG2P98160 SLC4A1APP2-201ENST00000424054 1259 ntBASIC11.24□□□□□ -0.61
HSPG2P98160 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.24□□□□□ -0.61
HSPG2P98160 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.24□□□□□ -0.61
HSPG2P98160 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 BCAR1-209ENST00000546196 1340 ntBASIC11.24□□□□□ -0.61
HSPG2P98160 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 MTMR9LP-203ENST00000426597 1545 ntBASIC11.24□□□□□ -0.61
HSPG2P98160 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.24□□□□□ -0.61
HSPG2P98160 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
HSPG2P98160 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
HSPG2P98160 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
HSPG2P98160 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
HSPG2P98160 ACTG1P14-201ENST00000446382 1122 ntBASIC11.24□□□□□ -0.61
HSPG2P98160 INGX-202ENST00000489074 768 ntBASIC11.24□□□□□ -0.61
HSPG2P98160 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms