Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL121832.2-201ENST00000610979 668 ntBASIC12.95□□□□□ -0.34
RPL39P62891 Six3os1_6.1-201ENST00000620790 196 ntBASIC12.95□□□□□ -0.34
RPL39P62891 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
RPL39P62891 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
RPL39P62891 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.94□□□□□ -0.34
RPL39P62891 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
RPL39P62891 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 CDCA4P2-201ENST00000441182 718 ntBASIC12.94□□□□□ -0.34
RPL39P62891 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 AC097658.1-201ENST00000475555 843 ntBASIC12.94□□□□□ -0.34
RPL39P62891 F2R-202ENST00000505600 442 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.94□□□□□ -0.34
RPL39P62891 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.94□□□□□ -0.34
RPL39P62891 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.94□□□□□ -0.34
RPL39P62891 AC022211.2-201ENST00000585075 2527 ntBASIC12.94□□□□□ -0.34
RPL39P62891 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.94□□□□□ -0.34
RPL39P62891 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
RPL39P62891 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
RPL39P62891 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RPL39P62891 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 RCC2P3-201ENST00000418112 1537 ntBASIC12.93□□□□□ -0.34
RPL39P62891 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
RPL39P62891 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.93□□□□□ -0.34
RPL39P62891 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.93□□□□□ -0.34
RPL39P62891 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
RPL39P62891 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.93□□□□□ -0.34
RPL39P62891 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.93□□□□□ -0.34
RPL39P62891 AC026185.1-201ENST00000445748 174 ntBASIC12.93□□□□□ -0.34
RPL39P62891 AL162430.1-201ENST00000480705 870 ntBASIC12.93□□□□□ -0.34
RPL39P62891 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.93□□□□□ -0.34
RPL39P62891 AC083906.2-201ENST00000511578 360 ntBASIC12.93□□□□□ -0.34
RPL39P62891 PRKY-204ENST00000533551 1019 ntBASIC12.93□□□□□ -0.34
RPL39P62891 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC12.93□□□□□ -0.34
RPL39P62891 AC022517.1-201ENST00000592429 346 ntBASIC12.93□□□□□ -0.34
RPL39P62891 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.93□□□□□ -0.34
RPL39P62891 NARF-204ENST00000390006 1766 ntTSL 2 BASIC12.93□□□□□ -0.34
RPL39P62891 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
RPL39P62891 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
RPL39P62891 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
RPL39P62891 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms