Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CDKN2CP42773 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.31■□□□□ 0.36
CDKN2CP42773 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDKN2CP42773 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKN2CP42773 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKN2CP42773 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDKN2CP42773 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKN2CP42773 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKN2CP42773 MIR149-201ENST00000384879 89 ntBASIC17.3■□□□□ 0.36
CDKN2CP42773 AL355355.2-201ENST00000442321 338 ntBASIC17.3■□□□□ 0.36
CDKN2CP42773 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.3■□□□□ 0.36
CDKN2CP42773 AC026471.5-201ENST00000615068 467 ntBASIC17.3■□□□□ 0.36
CDKN2CP42773 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.3■□□□□ 0.36
CDKN2CP42773 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CDKN2CP42773 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDKN2CP42773 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
CDKN2CP42773 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDKN2CP42773 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDKN2CP42773 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKN2CP42773 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2CP42773 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKN2CP42773 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2CP42773 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.29■□□□□ 0.36
CDKN2CP42773 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.29■□□□□ 0.36
CDKN2CP42773 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CDKN2CP42773 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDKN2CP42773 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDKN2CP42773 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKN2CP42773 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDKN2CP42773 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDKN2CP42773 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2CP42773 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.28■□□□□ 0.36
CDKN2CP42773 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.28■□□□□ 0.36
CDKN2CP42773 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.28■□□□□ 0.36
CDKN2CP42773 AP003041.3-201ENST00000527151 707 ntBASIC17.28■□□□□ 0.36
CDKN2CP42773 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2CP42773 AP005242.2-201ENST00000580065 1175 ntBASIC17.28■□□□□ 0.36
CDKN2CP42773 Z99916.2-201ENST00000604037 246 ntBASIC17.28■□□□□ 0.36
CDKN2CP42773 AL023803.3-201ENST00000615559 522 ntBASIC17.28■□□□□ 0.36
CDKN2CP42773 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
CDKN2CP42773 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDKN2CP42773 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 LINC01126-201ENST00000623515 1646 ntBASIC17.28■□□□□ 0.36
CDKN2CP42773 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDKN2CP42773 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.28■□□□□ 0.36
CDKN2CP42773 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKN2CP42773 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2CP42773 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2CP42773 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKN2CP42773 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2CP42773 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDKN2CP42773 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.27■□□□□ 0.36
CDKN2CP42773 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDKN2CP42773 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms