Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
GRIK1P39086 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.24■□□□□ 0.67
GRIK1P39086 BX323043.1-201ENST00000641006 1765 ntBASIC19.24■□□□□ 0.67
GRIK1P39086 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
GRIK1P39086 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GRIK1P39086 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.23■□□□□ 0.67
GRIK1P39086 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.23■□□□□ 0.67
GRIK1P39086 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
GRIK1P39086 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 AC087289.5-201ENST00000586076 3175 ntBASIC19.23■□□□□ 0.67
GRIK1P39086 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.23■□□□□ 0.67
GRIK1P39086 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GRIK1P39086 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 LINC00265-3P-201ENST00000447588 903 ntBASIC19.23■□□□□ 0.67
GRIK1P39086 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.23■□□□□ 0.67
GRIK1P39086 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.23■□□□□ 0.67
GRIK1P39086 MIR3652-201ENST00000579335 131 ntBASIC19.23■□□□□ 0.67
GRIK1P39086 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.23■□□□□ 0.67
GRIK1P39086 AC124864.1-201ENST00000623408 392 ntBASIC19.23■□□□□ 0.67
GRIK1P39086 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.23■□□□□ 0.67
GRIK1P39086 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
GRIK1P39086 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
GRIK1P39086 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.23■□□□□ 0.67
GRIK1P39086 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GRIK1P39086 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 LINC01126-201ENST00000623515 1646 ntBASIC19.22■□□□□ 0.67
GRIK1P39086 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
GRIK1P39086 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.22■□□□□ 0.67
GRIK1P39086 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GRIK1P39086 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 DRAXINP1-201ENST00000437611 948 ntBASIC19.22■□□□□ 0.67
GRIK1P39086 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.22■□□□□ 0.67
GRIK1P39086 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.22■□□□□ 0.67
GRIK1P39086 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 TPSP2-201ENST00000561760 610 ntBASIC19.22■□□□□ 0.67
GRIK1P39086 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.22■□□□□ 0.67
GRIK1P39086 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.22■□□□□ 0.67
GRIK1P39086 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.22■□□□□ 0.67
GRIK1P39086 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GRIK1P39086 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GRIK1P39086 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GRIK1P39086 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GRIK1P39086 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.21■□□□□ 0.67
GRIK1P39086 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.21■□□□□ 0.67
GRIK1P39086 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GRIK1P39086 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GRIK1P39086 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.21■□□□□ 0.67
GRIK1P39086 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.21■□□□□ 0.67
GRIK1P39086 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
GRIK1P39086 AC113404.2-201ENST00000507884 177 ntBASIC19.21■□□□□ 0.67
GRIK1P39086 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.21■□□□□ 0.67
GRIK1P39086 AP000867.3-201ENST00000524675 377 ntBASIC19.21■□□□□ 0.67
GRIK1P39086 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
GRIK1P39086 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.21■□□□□ 0.67
GRIK1P39086 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.21■□□□□ 0.67
GRIK1P39086 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GRIK1P39086 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms