Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC132938.6-201ENST00000623828 1655 ntBASIC19.71■□□□□ 0.75
HOXA11P31270 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HOXA11P31270 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
HOXA11P31270 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 AKR1C7P-201ENST00000305623 895 ntBASIC19.71■□□□□ 0.75
HOXA11P31270 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.71■□□□□ 0.75
HOXA11P31270 NUS1P2-201ENST00000417358 873 ntBASIC19.71■□□□□ 0.75
HOXA11P31270 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA11P31270 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXA11P31270 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.71■□□□□ 0.75
HOXA11P31270 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.71■□□□□ 0.75
HOXA11P31270 MIR5100-201ENST00000579544 119 ntBASIC19.71■□□□□ 0.75
HOXA11P31270 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA11P31270 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA11P31270 LINC01711-201ENST00000598340 967 ntBASIC19.71■□□□□ 0.75
HOXA11P31270 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.71■□□□□ 0.75
HOXA11P31270 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HOXA11P31270 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HOXA11P31270 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 AC018445.3-201ENST00000624177 1945 ntBASIC19.7■□□□□ 0.74
HOXA11P31270 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.7■□□□□ 0.74
HOXA11P31270 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 BX323043.1-201ENST00000641006 1765 ntBASIC19.7■□□□□ 0.74
HOXA11P31270 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HOXA11P31270 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HOXA11P31270 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA11P31270 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HOXA11P31270 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA11P31270 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA11P31270 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
HOXA11P31270 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.69■□□□□ 0.74
HOXA11P31270 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXA11P31270 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.69■□□□□ 0.74
HOXA11P31270 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA11P31270 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXA11P31270 AL138831.2-201ENST00000606564 490 ntBASIC19.69■□□□□ 0.74
HOXA11P31270 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXA11P31270 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA11P31270 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA11P31270 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA11P31270 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 RCN1P2-201ENST00000398357 915 ntBASIC19.68■□□□□ 0.74
HOXA11P31270 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
HOXA11P31270 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXA11P31270 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA11P31270 AC009078.2-202ENST00000463353 338 ntBASIC19.68■□□□□ 0.74
HOXA11P31270 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA11P31270 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXA11P31270 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.68■□□□□ 0.74
HOXA11P31270 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA11P31270 AL160237.2-201ENST00000556165 472 ntBASIC19.68■□□□□ 0.74
HOXA11P31270 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXA11P31270 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXA11P31270 AC114341.1-201ENST00000618070 349 ntBASIC19.68■□□□□ 0.74
HOXA11P31270 REXO1L6P-202ENST00000619970 1078 ntBASIC19.68■□□□□ 0.74
HOXA11P31270 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXA11P31270 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms