Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA9P31269 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA9P31269 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
HOXA9P31269 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA9P31269 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA9P31269 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA9P31269 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
HOXA9P31269 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HOXA9P31269 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HOXA9P31269 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 AC087289.5-201ENST00000586076 3175 ntBASIC18.98■□□□□ 0.63
HOXA9P31269 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA9P31269 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOXA9P31269 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.98■□□□□ 0.63
HOXA9P31269 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOXA9P31269 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOXA9P31269 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
HOXA9P31269 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXA9P31269 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
HOXA9P31269 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.98■□□□□ 0.63
HOXA9P31269 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA9P31269 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.98■□□□□ 0.63
HOXA9P31269 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.98■□□□□ 0.63
HOXA9P31269 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.98■□□□□ 0.63
HOXA9P31269 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HOXA9P31269 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
HOXA9P31269 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
HOXA9P31269 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
HOXA9P31269 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA9P31269 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
HOXA9P31269 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.97■□□□□ 0.63
HOXA9P31269 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.97■□□□□ 0.63
HOXA9P31269 KRT18P58-201ENST00000527480 1120 ntBASIC18.97■□□□□ 0.63
HOXA9P31269 SLC25A1P1-201ENST00000528351 927 ntBASIC18.97■□□□□ 0.63
HOXA9P31269 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA9P31269 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.97■□□□□ 0.63
HOXA9P31269 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 MTDHP3-201ENST00000594186 672 ntBASIC18.97■□□□□ 0.63
HOXA9P31269 AP001269.4-201ENST00000609611 512 ntBASIC18.97■□□□□ 0.63
HOXA9P31269 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.97■□□□□ 0.63
HOXA9P31269 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.97■□□□□ 0.63
HOXA9P31269 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.97■□□□□ 0.63
HOXA9P31269 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
HOXA9P31269 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA9P31269 AC243591.1-201ENST00000452967 1364 ntBASIC18.96■□□□□ 0.63
HOXA9P31269 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA9P31269 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA9P31269 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
HOXA9P31269 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 RPS2P28-201ENST00000314255 741 ntBASIC18.96■□□□□ 0.63
HOXA9P31269 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA9P31269 AC106730.1-201ENST00000566722 1090 ntBASIC18.96■□□□□ 0.63
HOXA9P31269 AC139887.3-201ENST00000568585 713 ntBASIC18.96■□□□□ 0.63
HOXA9P31269 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXA9P31269 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.96■□□□□ 0.63
HOXA9P31269 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA9P31269 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 MIR7706-201ENST00000613747 67 ntBASIC18.96■□□□□ 0.63
HOXA9P31269 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.96■□□□□ 0.63
HOXA9P31269 AC005332.7-201ENST00000614046 2005 ntBASIC18.96■□□□□ 0.63
HOXA9P31269 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
HOXA9P31269 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA9P31269 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.96■□□□□ 0.63
HOXA9P31269 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
HOXA9P31269 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HOXA9P31269 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
HOXA9P31269 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA9P31269 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA9P31269 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
HOXA9P31269 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HOXA9P31269 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms