Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.13■□□□□ 0.97
ERCC3P19447 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ERCC3P19447 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ERCC3P19447 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 AC091607.1-201ENST00000490318 1060 ntBASIC21.13■□□□□ 0.97
ERCC3P19447 AC009065.1-201ENST00000564055 1225 ntBASIC21.13■□□□□ 0.97
ERCC3P19447 AP005901.3-202ENST00000581653 237 ntBASIC21.13■□□□□ 0.97
ERCC3P19447 SLC25A6P4-201ENST00000586535 553 ntBASIC21.13■□□□□ 0.97
ERCC3P19447 AL121912.1-201ENST00000603683 238 ntBASIC21.13■□□□□ 0.97
ERCC3P19447 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.13■□□□□ 0.97
ERCC3P19447 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.13■□□□□ 0.97
ERCC3P19447 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ERCC3P19447 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC3P19447 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ERCC3P19447 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC3P19447 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.12■□□□□ 0.97
ERCC3P19447 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.12■□□□□ 0.97
ERCC3P19447 AC106795.1-205ENST00000512851 1056 ntBASIC21.12■□□□□ 0.97
ERCC3P19447 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.12■□□□□ 0.97
ERCC3P19447 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.12■□□□□ 0.97
ERCC3P19447 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.12■□□□□ 0.97
ERCC3P19447 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC3P19447 NSUN5P1-202ENST00000421140 1535 ntBASIC21.12■□□□□ 0.97
ERCC3P19447 NSUN5P2-203ENST00000457352 1529 ntBASIC21.12■□□□□ 0.97
ERCC3P19447 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 KRT89P-201ENST00000620027 1478 ntBASIC21.12■□□□□ 0.97
ERCC3P19447 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC3P19447 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.12■□□□□ 0.97
ERCC3P19447 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.12■□□□□ 0.97
ERCC3P19447 HEIH-201ENST00000623091 1652 ntBASIC21.12■□□□□ 0.97
ERCC3P19447 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ERCC3P19447 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.11■□□□□ 0.97
ERCC3P19447 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ERCC3P19447 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
ERCC3P19447 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.11■□□□□ 0.97
ERCC3P19447 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ERCC3P19447 AC093503.3-201ENST00000624917 2352 ntBASIC21.11■□□□□ 0.97
ERCC3P19447 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ERCC3P19447 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.11■□□□□ 0.97
ERCC3P19447 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ERCC3P19447 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ERCC3P19447 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.11■□□□□ 0.97
ERCC3P19447 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.1■□□□□ 0.97
ERCC3P19447 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC3P19447 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC3P19447 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC3P19447 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.1■□□□□ 0.97
ERCC3P19447 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC3P19447 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ERCC3P19447 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ERCC3P19447 AKR1C7P-201ENST00000305623 895 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms