Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHRNB1P11230 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 MTMR9LP-203ENST00000426597 1545 ntBASIC18.5■□□□□ 0.55
CHRNB1P11230 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CHRNB1P11230 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 AC068472.1-201ENST00000474589 881 ntBASIC18.5■□□□□ 0.55
CHRNB1P11230 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRNB1P11230 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.5■□□□□ 0.55
CHRNB1P11230 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 AP001269.4-201ENST00000609611 512 ntBASIC18.5■□□□□ 0.55
CHRNB1P11230 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CHRNB1P11230 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHRNB1P11230 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.5■□□□□ 0.55
CHRNB1P11230 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CHRNB1P11230 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.5■□□□□ 0.55
CHRNB1P11230 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CHRNB1P11230 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CHRNB1P11230 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CHRNB1P11230 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHRNB1P11230 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHRNB1P11230 RPS2P28-201ENST00000314255 741 ntBASIC18.49■□□□□ 0.55
CHRNB1P11230 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 FAM220CP-201ENST00000395253 831 ntBASIC18.49■□□□□ 0.55
CHRNB1P11230 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CHRNB1P11230 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNB1P11230 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.49■□□□□ 0.55
CHRNB1P11230 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.49■□□□□ 0.55
CHRNB1P11230 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNB1P11230 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CHRNB1P11230 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNB1P11230 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNB1P11230 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.49■□□□□ 0.55
CHRNB1P11230 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.49■□□□□ 0.55
CHRNB1P11230 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CHRNB1P11230 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNB1P11230 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNB1P11230 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 AC009533.2-201ENST00000543664 586 ntBASIC18.48■□□□□ 0.55
CHRNB1P11230 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRNB1P11230 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNB1P11230 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CHRNB1P11230 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.48■□□□□ 0.55
CHRNB1P11230 AC008687.5-201ENST00000593746 558 ntBASIC18.48■□□□□ 0.55
CHRNB1P11230 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHRNB1P11230 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.48■□□□□ 0.55
CHRNB1P11230 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRNB1P11230 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRNB1P11230 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNB1P11230 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHRNB1P11230 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNB1P11230 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHRNB1P11230 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 INTS4P1-201ENST00000438455 1935 ntBASIC18.47■□□□□ 0.55
CHRNB1P11230 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRNB1P11230 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 MIR149-201ENST00000384879 89 ntBASIC18.47■□□□□ 0.55
CHRNB1P11230 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CHRNB1P11230 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNB1P11230 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms