Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.06■□□□□ 0.16
UBCP0CG48 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.06■□□□□ 0.16
UBCP0CG48 CA15P1-201ENST00000481698 905 ntBASIC16.06■□□□□ 0.16
UBCP0CG48 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 AC106820.2-201ENST00000563775 3264 ntBASIC16.06■□□□□ 0.16
UBCP0CG48 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.06■□□□□ 0.16
UBCP0CG48 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBCP0CG48 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBCP0CG48 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.05■□□□□ 0.16
UBCP0CG48 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.05■□□□□ 0.16
UBCP0CG48 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
UBCP0CG48 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.05■□□□□ 0.16
UBCP0CG48 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
UBCP0CG48 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.05■□□□□ 0.16
UBCP0CG48 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 KRT8P50-201ENST00000562022 1438 ntBASIC16.05■□□□□ 0.16
UBCP0CG48 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
UBCP0CG48 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UBCP0CG48 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
UBCP0CG48 FAM197Y1-201ENST00000421178 764 ntBASIC16.05■□□□□ 0.16
UBCP0CG48 MFAP1P1-201ENST00000442257 1255 ntBASIC16.05■□□□□ 0.16
UBCP0CG48 CD177P1-201ENST00000606252 935 ntBASIC16.05■□□□□ 0.16
UBCP0CG48 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.05■□□□□ 0.16
UBCP0CG48 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.05■□□□□ 0.16
UBCP0CG48 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UBCP0CG48 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.05■□□□□ 0.16
UBCP0CG48 AC009053.2-201ENST00000563701 2365 ntBASIC16.05■□□□□ 0.16
UBCP0CG48 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBCP0CG48 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 AC134043.2-201ENST00000624206 2238 ntBASIC16.04■□□□□ 0.16
UBCP0CG48 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
UBCP0CG48 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UBCP0CG48 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UBCP0CG48 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UBCP0CG48 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.04■□□□□ 0.16
UBCP0CG48 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
UBCP0CG48 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
UBCP0CG48 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.04■□□□□ 0.16
UBCP0CG48 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.04■□□□□ 0.16
UBCP0CG48 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.04■□□□□ 0.16
UBCP0CG48 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 SLC25A1P4-201ENST00000567977 778 ntBASIC16.04■□□□□ 0.16
UBCP0CG48 MIR3180-5-201ENST00000583743 153 ntBASIC16.04■□□□□ 0.16
UBCP0CG48 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
UBCP0CG48 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
UBCP0CG48 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBCP0CG48 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
UBCP0CG48 AL096828.2-201ENST00000567259 1965 ntBASIC16.04■□□□□ 0.16
UBCP0CG48 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.04■□□□□ 0.16
UBCP0CG48 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.03■□□□□ 0.16
UBCP0CG48 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBCP0CG48 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms