Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 MIR3917-201ENST00000580971 93 ntBASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCNYL3P0C7X3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCNYL3P0C7X3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCNYL3P0C7X3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCNYL3P0C7X3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CCNYL3P0C7X3 AL512353.2-201ENST00000448759 1962 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 KRT18P23-201ENST00000435622 1283 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 TSSC2-201ENST00000450217 709 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 MIR3652-201ENST00000579335 131 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 AC092119.3-201ENST00000612618 583 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 AL157888.1-201ENST00000631930 593 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 FZD10-202ENST00000539839 3282 ntBASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCNYL3P0C7X3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 AC120057.1-201ENST00000483947 663 ntBASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 AL121894.2-201ENST00000602977 491 ntBASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 AC244517.3-201ENST00000616254 1235 ntBASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCNYL3P0C7X3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCNYL3P0C7X3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms