Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CYP3A4P08684 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CYP3A4P08684 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CYP3A4P08684 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.52■□□□□ 0.87
CYP3A4P08684 AC009113.1-201ENST00000570267 2443 ntBASIC20.52■□□□□ 0.87
CYP3A4P08684 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.52■□□□□ 0.87
CYP3A4P08684 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CYP3A4P08684 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.52■□□□□ 0.87
CYP3A4P08684 AC120498.9-201ENST00000339021 3867 ntBASIC20.52■□□□□ 0.87
CYP3A4P08684 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.51■□□□□ 0.87
CYP3A4P08684 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
CYP3A4P08684 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.51■□□□□ 0.87
CYP3A4P08684 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CYP3A4P08684 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.51■□□□□ 0.87
CYP3A4P08684 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
CYP3A4P08684 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.51■□□□□ 0.87
CYP3A4P08684 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CYP3A4P08684 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.5■□□□□ 0.87
CYP3A4P08684 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.5■□□□□ 0.87
CYP3A4P08684 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.5■□□□□ 0.87
CYP3A4P08684 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.5■□□□□ 0.87
CYP3A4P08684 AC246785.2-201ENST00000432512 513 ntBASIC20.5■□□□□ 0.87
CYP3A4P08684 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 KRT18P56-201ENST00000507275 550 ntBASIC20.5■□□□□ 0.87
CYP3A4P08684 DUTP2-201ENST00000519164 463 ntBASIC20.5■□□□□ 0.87
CYP3A4P08684 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.5■□□□□ 0.87
CYP3A4P08684 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.5■□□□□ 0.87
CYP3A4P08684 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CYP3A4P08684 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CYP3A4P08684 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.5■□□□□ 0.87
CYP3A4P08684 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.49■□□□□ 0.87
CYP3A4P08684 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 AC233702.3-201ENST00000578656 1387 ntBASIC20.49■□□□□ 0.87
CYP3A4P08684 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.49■□□□□ 0.87
CYP3A4P08684 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 AL096828.2-201ENST00000567259 1965 ntBASIC20.49■□□□□ 0.87
CYP3A4P08684 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CYP3A4P08684 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CYP3A4P08684 TOB2P1-201ENST00000469761 992 ntBASIC20.49■□□□□ 0.87
CYP3A4P08684 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CYP3A4P08684 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.49■□□□□ 0.87
CYP3A4P08684 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CYP3A4P08684 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CYP3A4P08684 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.49■□□□□ 0.87
CYP3A4P08684 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.49■□□□□ 0.87
CYP3A4P08684 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.48■□□□□ 0.87
CYP3A4P08684 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CYP3A4P08684 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CYP3A4P08684 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.48■□□□□ 0.87
CYP3A4P08684 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CYP3A4P08684 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CYP3A4P08684 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CYP3A4P08684 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.48■□□□□ 0.87
CYP3A4P08684 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms