Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 INTS4P1-201ENST00000438455 1935 ntBASIC18.9■□□□□ 0.62
RHOP08100 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RHOP08100 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RHOP08100 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.9■□□□□ 0.62
RHOP08100 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
RHOP08100 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.9■□□□□ 0.62
RHOP08100 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.9■□□□□ 0.62
RHOP08100 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RHOP08100 RBM17P3-201ENST00000417687 1192 ntBASIC18.9■□□□□ 0.62
RHOP08100 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.9■□□□□ 0.62
RHOP08100 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.9■□□□□ 0.62
RHOP08100 AC073648.2-201ENST00000510116 352 ntBASIC18.9■□□□□ 0.62
RHOP08100 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.9■□□□□ 0.62
RHOP08100 AP001269.4-201ENST00000609611 512 ntBASIC18.9■□□□□ 0.62
RHOP08100 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.9■□□□□ 0.62
RHOP08100 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.9■□□□□ 0.62
RHOP08100 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RHOP08100 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.9■□□□□ 0.62
RHOP08100 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RHOP08100 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RHOP08100 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.89■□□□□ 0.61
RHOP08100 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.89■□□□□ 0.61
RHOP08100 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.89■□□□□ 0.61
RHOP08100 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.89■□□□□ 0.61
RHOP08100 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RHOP08100 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.89■□□□□ 0.61
RHOP08100 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.89■□□□□ 0.61
RHOP08100 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RHOP08100 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 AC011467.2-201ENST00000598425 242 ntBASIC18.89■□□□□ 0.61
RHOP08100 AC243591.1-201ENST00000452967 1364 ntBASIC18.89■□□□□ 0.61
RHOP08100 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RHOP08100 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.89■□□□□ 0.61
RHOP08100 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RHOP08100 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.89■□□□□ 0.61
RHOP08100 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RHOP08100 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RHOP08100 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.88■□□□□ 0.61
RHOP08100 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 AC116562.4-201ENST00000641316 2276 ntBASIC18.88■□□□□ 0.61
RHOP08100 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.88■□□□□ 0.61
RHOP08100 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.88■□□□□ 0.61
RHOP08100 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.88■□□□□ 0.61
RHOP08100 AL049840.3-201ENST00000602669 611 ntBASIC18.88■□□□□ 0.61
RHOP08100 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.88■□□□□ 0.61
RHOP08100 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.88■□□□□ 0.61
RHOP08100 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.88■□□□□ 0.61
RHOP08100 AC125634.1-201ENST00000438758 1403 ntBASIC18.88■□□□□ 0.61
RHOP08100 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RHOP08100 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.88■□□□□ 0.61
RHOP08100 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RHOP08100 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.88■□□□□ 0.61
RHOP08100 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RHOP08100 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
RHOP08100 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.87■□□□□ 0.61
RHOP08100 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.87■□□□□ 0.61
RHOP08100 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.87■□□□□ 0.61
RHOP08100 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RHOP08100 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RHOP08100 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.87■□□□□ 0.61
RHOP08100 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RHOP08100 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RHOP08100 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RHOP08100 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.87■□□□□ 0.61
RHOP08100 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.87■□□□□ 0.61
RHOP08100 MIR7706-201ENST00000613747 67 ntBASIC18.87■□□□□ 0.61
RHOP08100 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms