Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.16■□□□□ 0.82
CD4P01730 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.16■□□□□ 0.82
CD4P01730 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.16■□□□□ 0.82
CD4P01730 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.16■□□□□ 0.82
CD4P01730 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 MTDHP3-201ENST00000594186 672 ntBASIC20.16■□□□□ 0.82
CD4P01730 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.16■□□□□ 0.82
CD4P01730 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.16■□□□□ 0.82
CD4P01730 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.16■□□□□ 0.82
CD4P01730 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CD4P01730 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CD4P01730 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CD4P01730 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 HEIH-201ENST00000623091 1652 ntBASIC20.16■□□□□ 0.82
CD4P01730 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.16■□□□□ 0.82
CD4P01730 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.15■□□□□ 0.82
CD4P01730 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.15■□□□□ 0.82
CD4P01730 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.15■□□□□ 0.82
CD4P01730 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.15■□□□□ 0.82
CD4P01730 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 FAM220CP-201ENST00000395253 831 ntBASIC20.15■□□□□ 0.82
CD4P01730 MIR940-201ENST00000401276 94 ntBASIC20.15■□□□□ 0.82
CD4P01730 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 PGAM5P1-201ENST00000518923 814 ntBASIC20.15■□□□□ 0.82
CD4P01730 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.15■□□□□ 0.82
CD4P01730 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.15■□□□□ 0.82
CD4P01730 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.15■□□□□ 0.82
CD4P01730 AP001269.4-201ENST00000609611 512 ntBASIC20.15■□□□□ 0.82
CD4P01730 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CD4P01730 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.15■□□□□ 0.82
CD4P01730 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CD4P01730 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CD4P01730 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CD4P01730 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CD4P01730 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CD4P01730 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CD4P01730 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.14■□□□□ 0.81
CD4P01730 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 AC112777.1-201ENST00000540175 1423 ntBASIC20.14■□□□□ 0.81
CD4P01730 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CD4P01730 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CD4P01730 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 AC068472.1-201ENST00000474589 881 ntBASIC20.14■□□□□ 0.81
CD4P01730 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.14■□□□□ 0.81
CD4P01730 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.14■□□□□ 0.81
CD4P01730 AC145285.3-201ENST00000564603 959 ntBASIC20.14■□□□□ 0.81
CD4P01730 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.14■□□□□ 0.81
CD4P01730 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CD4P01730 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CD4P01730 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CD4P01730 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CD4P01730 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CD4P01730 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 MTMR9LP-203ENST00000426597 1545 ntBASIC20.13■□□□□ 0.81
CD4P01730 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.13■□□□□ 0.81
CD4P01730 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.13■□□□□ 0.81
CD4P01730 AC005104.2-201ENST00000427818 678 ntBASIC20.13■□□□□ 0.81
CD4P01730 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CD4P01730 IGHV3-22-201ENST00000520721 359 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms