Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN3O95197 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RTN3O95197 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 IGHGP-201ENST00000390555 1178 ntBASIC19.24■□□□□ 0.67
RTN3O95197 CHCHD2P8-201ENST00000429873 447 ntBASIC19.24■□□□□ 0.67
RTN3O95197 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.24■□□□□ 0.67
RTN3O95197 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN3O95197 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.24■□□□□ 0.67
RTN3O95197 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN3O95197 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.24■□□□□ 0.67
RTN3O95197 AL390719.2-201ENST00000606993 987 ntBASIC19.24■□□□□ 0.67
RTN3O95197 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
RTN3O95197 NPAP1P7-201ENST00000613027 823 ntBASIC19.24■□□□□ 0.67
RTN3O95197 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RTN3O95197 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN3O95197 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
RTN3O95197 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RTN3O95197 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.23■□□□□ 0.67
RTN3O95197 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RTN3O95197 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.23■□□□□ 0.67
RTN3O95197 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.23■□□□□ 0.67
RTN3O95197 KRT18P56-201ENST00000507275 550 ntBASIC19.23■□□□□ 0.67
RTN3O95197 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.23■□□□□ 0.67
RTN3O95197 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.23■□□□□ 0.67
RTN3O95197 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.23■□□□□ 0.67
RTN3O95197 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RTN3O95197 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.23■□□□□ 0.67
RTN3O95197 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
RTN3O95197 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RTN3O95197 SDHAP2-201ENST00000455183 2001 ntBASIC19.23■□□□□ 0.67
RTN3O95197 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
RTN3O95197 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN3O95197 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTN3O95197 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN3O95197 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
RTN3O95197 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 AL031598.1-201ENST00000561511 1773 ntBASIC19.22■□□□□ 0.67
RTN3O95197 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTN3O95197 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTN3O95197 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN3O95197 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTN3O95197 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.22■□□□□ 0.67
RTN3O95197 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN3O95197 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN3O95197 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN3O95197 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTN3O95197 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RTN3O95197 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN3O95197 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN3O95197 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms