Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 SPDYE13P-201ENST00000445314 798 ntBASIC19.94■□□□□ 0.78
TGFB1I1O43294 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TGFB1I1O43294 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TGFB1I1O43294 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
TGFB1I1O43294 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TGFB1I1O43294 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TGFB1I1O43294 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TGFB1I1O43294 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.94■□□□□ 0.78
TGFB1I1O43294 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.93■□□□□ 0.78
TGFB1I1O43294 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TGFB1I1O43294 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 AP000997.3-201ENST00000623333 2250 ntBASIC19.92■□□□□ 0.78
TGFB1I1O43294 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.92■□□□□ 0.78
TGFB1I1O43294 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 AC024563.2-201ENST00000603282 481 ntBASIC19.92■□□□□ 0.78
TGFB1I1O43294 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.92■□□□□ 0.78
TGFB1I1O43294 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 AC018470.1-201ENST00000624790 3129 ntBASIC19.92■□□□□ 0.78
TGFB1I1O43294 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 LINC00167-201ENST00000530583 1419 ntBASIC19.92■□□□□ 0.78
TGFB1I1O43294 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TGFB1I1O43294 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFB1I1O43294 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 MIR662-201ENST00000384847 95 ntBASIC19.91■□□□□ 0.78
TGFB1I1O43294 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 AC092647.4-201ENST00000457211 535 ntBASIC19.91■□□□□ 0.78
TGFB1I1O43294 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.91■□□□□ 0.78
TGFB1I1O43294 AC083849.1-201ENST00000615227 514 ntBASIC19.91■□□□□ 0.78
TGFB1I1O43294 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.91■□□□□ 0.78
TGFB1I1O43294 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFB1I1O43294 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms