Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.77■□□□□ 0.76
TNRC18O15417 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNRC18O15417 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.77■□□□□ 0.76
TNRC18O15417 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TNRC18O15417 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNRC18O15417 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TNRC18O15417 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TNRC18O15417 SLC25A39P2-201ENST00000537614 270 ntBASIC19.77■□□□□ 0.75
TNRC18O15417 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.77■□□□□ 0.75
TNRC18O15417 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TNRC18O15417 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 FEM1AP4-201ENST00000443167 1987 ntBASIC19.76■□□□□ 0.75
TNRC18O15417 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.76■□□□□ 0.75
TNRC18O15417 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TNRC18O15417 PIN1P1-201ENST00000412108 996 ntBASIC19.76■□□□□ 0.75
TNRC18O15417 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.76■□□□□ 0.75
TNRC18O15417 AL512356.2-201ENST00000546955 174 ntBASIC19.76■□□□□ 0.75
TNRC18O15417 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TNRC18O15417 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.76■□□□□ 0.75
TNRC18O15417 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.76■□□□□ 0.75
TNRC18O15417 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.76■□□□□ 0.75
TNRC18O15417 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TNRC18O15417 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.76■□□□□ 0.75
TNRC18O15417 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.76■□□□□ 0.75
TNRC18O15417 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.76■□□□□ 0.75
TNRC18O15417 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.76■□□□□ 0.75
TNRC18O15417 MIR6787-201ENST00000616675 61 ntBASIC19.76■□□□□ 0.75
TNRC18O15417 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNRC18O15417 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
TNRC18O15417 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.75■□□□□ 0.75
TNRC18O15417 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.75■□□□□ 0.75
TNRC18O15417 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.75■□□□□ 0.75
TNRC18O15417 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.75■□□□□ 0.75
TNRC18O15417 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.75■□□□□ 0.75
TNRC18O15417 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
TNRC18O15417 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.75■□□□□ 0.75
TNRC18O15417 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.75■□□□□ 0.75
TNRC18O15417 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC19.75■□□□□ 0.75
TNRC18O15417 AC004790.2-201ENST00000623588 572 ntBASIC19.75■□□□□ 0.75
TNRC18O15417 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.75■□□□□ 0.75
TNRC18O15417 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNRC18O15417 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TNRC18O15417 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNRC18O15417 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TNRC18O15417 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TNRC18O15417 KRT17P7-201ENST00000451704 1104 ntBASIC19.74■□□□□ 0.75
TNRC18O15417 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.74■□□□□ 0.75
TNRC18O15417 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.74■□□□□ 0.75
TNRC18O15417 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.74■□□□□ 0.75
TNRC18O15417 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.74■□□□□ 0.75
TNRC18O15417 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.74■□□□□ 0.75
TNRC18O15417 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TNRC18O15417 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.74■□□□□ 0.75
TNRC18O15417 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.74■□□□□ 0.75
TNRC18O15417 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.74■□□□□ 0.75
TNRC18O15417 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNRC18O15417 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNRC18O15417 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.74■□□□□ 0.75
TNRC18O15417 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.74■□□□□ 0.75
TNRC18O15417 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
TNRC18O15417 RETN-203ENST00000629642 400 ntTSL 5 BASIC19.74■□□□□ 0.75
TNRC18O15417 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
TNRC18O15417 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.74■□□□□ 0.75
TNRC18O15417 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TNRC18O15417 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.73■□□□□ 0.75
TNRC18O15417 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.73■□□□□ 0.75
TNRC18O15417 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.73■□□□□ 0.75
TNRC18O15417 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.73■□□□□ 0.75
TNRC18O15417 AC008687.5-201ENST00000593746 558 ntBASIC19.73■□□□□ 0.75
TNRC18O15417 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.73■□□□□ 0.75
TNRC18O15417 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.73■□□□□ 0.75
TNRC18O15417 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNRC18O15417 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TNRC18O15417 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms