Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ABCD4O14678 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCD4O14678 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 FAM86EP-206ENST00000510506 987 ntBASIC16.19■□□□□ 0.18
ABCD4O14678 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCD4O14678 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.19■□□□□ 0.18
ABCD4O14678 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD4O14678 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD4O14678 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ABCD4O14678 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ABCD4O14678 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ABCD4O14678 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.19■□□□□ 0.18
ABCD4O14678 LINC01311-201ENST00000565162 1445 ntBASIC16.19■□□□□ 0.18
ABCD4O14678 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ABCD4O14678 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ABCD4O14678 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.18■□□□□ 0.18
ABCD4O14678 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 AL109659.2-201ENST00000606809 1674 ntBASIC16.18■□□□□ 0.18
ABCD4O14678 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD4O14678 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 AC008556.1-201ENST00000610908 2040 ntBASIC16.18■□□□□ 0.18
ABCD4O14678 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ABCD4O14678 IER3-202ENST00000376377 1350 ntBASIC16.18■□□□□ 0.18
ABCD4O14678 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD4O14678 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ABCD4O14678 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCD4O14678 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD4O14678 VENTXP5-201ENST00000523979 775 ntBASIC16.18■□□□□ 0.18
ABCD4O14678 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCD4O14678 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
ABCD4O14678 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD4O14678 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD4O14678 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
ABCD4O14678 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.18■□□□□ 0.18
ABCD4O14678 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ABCD4O14678 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.18■□□□□ 0.18
ABCD4O14678 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.18■□□□□ 0.18
ABCD4O14678 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
ABCD4O14678 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD4O14678 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.17■□□□□ 0.18
ABCD4O14678 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 RASA4DP-201ENST00000460726 1199 ntBASIC16.17■□□□□ 0.18
ABCD4O14678 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.17■□□□□ 0.18
ABCD4O14678 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.17■□□□□ 0.18
ABCD4O14678 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.17■□□□□ 0.18
ABCD4O14678 AC083849.1-201ENST00000615227 514 ntBASIC16.17■□□□□ 0.18
ABCD4O14678 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD4O14678 AC112497.1-201ENST00000624824 639 ntBASIC16.17■□□□□ 0.18
ABCD4O14678 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD4O14678 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
ABCD4O14678 AC124067.4-201ENST00000519691 2379 ntBASIC16.17■□□□□ 0.18
ABCD4O14678 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.17■□□□□ 0.18
ABCD4O14678 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 AC009113.1-201ENST00000570267 2443 ntBASIC16.17■□□□□ 0.18
ABCD4O14678 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ABCD4O14678 AC005332.1-201ENST00000577698 1310 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms