Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM1O00151 AC133681.1-201ENST00000465482 601 ntBASIC17.44■□□□□ 0.38
PDLIM1O00151 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM1O00151 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.44■□□□□ 0.38
PDLIM1O00151 RPPH1-201ENST00000516869 333 ntBASIC17.44■□□□□ 0.38
PDLIM1O00151 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.44■□□□□ 0.38
PDLIM1O00151 AL359736.2-201ENST00000621992 437 ntBASIC17.44■□□□□ 0.38
PDLIM1O00151 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 NKILA-202ENST00000614771 2598 ntBASIC17.44■□□□□ 0.38
PDLIM1O00151 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM1O00151 HEIH-201ENST00000623091 1652 ntBASIC17.44■□□□□ 0.38
PDLIM1O00151 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PDLIM1O00151 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PDLIM1O00151 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM1O00151 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.44■□□□□ 0.38
PDLIM1O00151 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 AC108860.2-201ENST00000562760 2183 ntBASIC17.43■□□□□ 0.38
PDLIM1O00151 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM1O00151 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDLIM1O00151 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 REXO1L9P-201ENST00000604264 2108 ntBASIC17.43■□□□□ 0.38
PDLIM1O00151 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PDLIM1O00151 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PDLIM1O00151 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDLIM1O00151 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PDLIM1O00151 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM1O00151 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDLIM1O00151 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM1O00151 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PDLIM1O00151 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM1O00151 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM1O00151 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM1O00151 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM1O00151 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM1O00151 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM1O00151 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM1O00151 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM1O00151 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PDLIM1O00151 C1QBPP2-201ENST00000528754 825 ntBASIC17.42■□□□□ 0.38
PDLIM1O00151 AC142381.4-202ENST00000563973 229 ntBASIC17.42■□□□□ 0.38
PDLIM1O00151 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 AC124016.1-201ENST00000609552 612 ntBASIC17.42■□□□□ 0.38
PDLIM1O00151 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM1O00151 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM1O00151 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM1O00151 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM1O00151 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms