Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 RPS8P6-201ENST00000426177 609 ntBASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 AL049812.1-201ENST00000432563 2267 ntBASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC23.2■■□□□ 1.3
LOC102724428A0A0B4J2F2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 DNAJB3-201ENST00000446806 729 ntBASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 AP000867.4-201ENST00000641616 219 ntBASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.19■■□□□ 1.3
LOC102724428A0A0B4J2F2 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 HNRNPA1P28-201ENST00000424481 961 ntBASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC004967.1-201ENST00000453589 447 ntBASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 MIR3687-2-201ENST00000577708 61 ntBASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 MIR3687-1-201ENST00000614492 61 ntBASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LOC102724428A0A0B4J2F2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC004832.2-201ENST00000426397 482 ntBASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC112698.1-201ENST00000510299 916 ntBASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC027796.2-201ENST00000575326 344 ntBASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
LOC102724428A0A0B4J2F2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC007967.2-201ENST00000432613 625 ntBASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 RNA5SP416-201ENST00000516838 111 ntBASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 AC134684.3-201ENST00000641758 218 ntBASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LOC102724428A0A0B4J2F2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.15■■□□□ 1.3
LOC102724428A0A0B4J2F2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms