Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 RCN1P1-201ENST00000400413 996 ntBASIC18.4■□□□□ 0.54
PKP3Q9Y446 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 AC117947.1-201ENST00000427448 529 ntBASIC18.4■□□□□ 0.54
PKP3Q9Y446 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 AL441883.1-201ENST00000566170 1045 ntBASIC18.4■□□□□ 0.54
PKP3Q9Y446 AC011558.1-201ENST00000623459 338 ntBASIC18.4■□□□□ 0.54
PKP3Q9Y446 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PKP3Q9Y446 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 AC099343.3-201ENST00000605834 2503 ntBASIC18.4■□□□□ 0.54
PKP3Q9Y446 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.4■□□□□ 0.54
PKP3Q9Y446 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
PKP3Q9Y446 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PKP3Q9Y446 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
PKP3Q9Y446 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
PKP3Q9Y446 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PKP3Q9Y446 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 RNF152P1-201ENST00000397754 604 ntBASIC18.39■□□□□ 0.53
PKP3Q9Y446 AK4P3-201ENST00000418260 669 ntBASIC18.39■□□□□ 0.53
PKP3Q9Y446 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 RN7SL850P-201ENST00000579959 291 ntBASIC18.39■□□□□ 0.53
PKP3Q9Y446 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.39■□□□□ 0.53
PKP3Q9Y446 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PKP3Q9Y446 SDHAP2-201ENST00000455183 2001 ntBASIC18.39■□□□□ 0.53
PKP3Q9Y446 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 TMPOP1-202ENST00000424642 1267 ntBASIC18.38■□□□□ 0.53
PKP3Q9Y446 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PKP3Q9Y446 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 GMCL1P1-201ENST00000463439 1581 ntBASIC18.38■□□□□ 0.53
PKP3Q9Y446 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
PKP3Q9Y446 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.37■□□□□ 0.53
PKP3Q9Y446 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PKP3Q9Y446 TSPY5P-201ENST00000426936 936 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms