Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MRPS28Q9Y2Q9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 MCCD1P1-208ENST00000445732 328 ntBASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 B3GAT3P1-201ENST00000471720 806 ntBASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 AF186192.3-201ENST00000583427 947 ntBASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
MRPS28Q9Y2Q9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 AL096828.2-201ENST00000567259 1965 ntBASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 AL023284.2-201ENST00000405850 579 ntBASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
MRPS28Q9Y2Q9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 AC034236.2-201ENST00000606662 1610 ntBASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.78■□□□□ 0.12
MRPS28Q9Y2Q9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms