Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 TUBB8P6-201ENST00000436895 1288 ntBASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 OR13I1P-201ENST00000609811 1264 ntBASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SCAF1Q9H7N4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 AP002383.4-201ENST00000442518 975 ntBASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
SCAF1Q9H7N4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 AL139424.1-201ENST00000607572 797 ntBASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 AC046158.3-201ENST00000624947 2558 ntBASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCAF1Q9H7N4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 HLA-A-201ENST00000376802 1334 ntBASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 Z97985.1-201ENST00000332270 946 ntBASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 AC006518.1-201ENST00000541449 943 ntBASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 CEP83-AS1-201ENST00000623122 2482 ntBASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 BX119927.1-201ENST00000636596 1552 ntBASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCAF1Q9H7N4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 RASA4DP-201ENST00000460726 1199 ntBASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 PNN-202ENST00000553331 656 ntTSL 3 BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 AL121772.3-201ENST00000610840 674 ntBASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SCAF1Q9H7N4 AC092720.2-201ENST00000602388 1665 ntBASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 AC011498.5-201ENST00000592027 486 ntBASIC27.2■■□□□ 1.95
SCAF1Q9H7N4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms