Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF41Q9H4P4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 IGHGP-201ENST00000390555 1178 ntBASIC21.56■■□□□ 1.04
RNF41Q9H4P4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 AC011498.5-201ENST00000592027 486 ntBASIC21.56■■□□□ 1.04
RNF41Q9H4P4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.56■■□□□ 1.04
RNF41Q9H4P4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RNF41Q9H4P4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 AC005332.3-201ENST00000589904 676 ntBASIC21.55■■□□□ 1.04
RNF41Q9H4P4 GPR32P1-201ENST00000601788 811 ntBASIC21.55■■□□□ 1.04
RNF41Q9H4P4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.55■■□□□ 1.04
RNF41Q9H4P4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 RNF126P1-202ENST00000569893 925 ntBASIC21.54■■□□□ 1.04
RNF41Q9H4P4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF41Q9H4P4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF41Q9H4P4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms