Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 RNF126P1-202ENST00000569893 925 ntBASIC21.7■■□□□ 1.06
NBPF3Q9H094 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NBPF3Q9H094 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NBPF3Q9H094 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 AC004870.1-201ENST00000315132 882 ntBASIC21.69■■□□□ 1.06
NBPF3Q9H094 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 AL162741.1-201ENST00000565563 1558 ntBASIC21.69■■□□□ 1.06
NBPF3Q9H094 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.69■■□□□ 1.06
NBPF3Q9H094 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NBPF3Q9H094 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.68■■□□□ 1.06
NBPF3Q9H094 AL845331.1-201ENST00000424978 1190 ntBASIC21.68■■□□□ 1.06
NBPF3Q9H094 AC009065.1-201ENST00000564055 1225 ntBASIC21.68■■□□□ 1.06
NBPF3Q9H094 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.68■■□□□ 1.06
NBPF3Q9H094 AC092119.3-201ENST00000612618 583 ntBASIC21.68■■□□□ 1.06
NBPF3Q9H094 NPAP1P7-201ENST00000613027 823 ntBASIC21.68■■□□□ 1.06
NBPF3Q9H094 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.68■■□□□ 1.06
NBPF3Q9H094 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.68■■□□□ 1.06
NBPF3Q9H094 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
NBPF3Q9H094 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NBPF3Q9H094 AC135776.1-201ENST00000319817 2481 ntBASIC21.68■■□□□ 1.06
NBPF3Q9H094 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 AC093677.2-201ENST00000600169 1863 ntBASIC21.67■■□□□ 1.06
NBPF3Q9H094 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 KRT8P10-201ENST00000450021 1447 ntBASIC21.67■■□□□ 1.06
NBPF3Q9H094 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 KRT17P6-201ENST00000453795 1220 ntBASIC21.67■■□□□ 1.06
NBPF3Q9H094 AC111152.3-201ENST00000569699 673 ntBASIC21.67■■□□□ 1.06
NBPF3Q9H094 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 NEFHP1-201ENST00000412845 2629 ntBASIC21.67■■□□□ 1.06
NBPF3Q9H094 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
NBPF3Q9H094 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NBPF3Q9H094 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.66■■□□□ 1.06
NBPF3Q9H094 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.66■■□□□ 1.06
NBPF3Q9H094 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NBPF3Q9H094 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.66■■□□□ 1.06
NBPF3Q9H094 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NBPF3Q9H094 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.66■■□□□ 1.06
NBPF3Q9H094 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.66■■□□□ 1.06
NBPF3Q9H094 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NBPF3Q9H094 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NBPF3Q9H094 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms