Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 AC104581.1-202ENST00000635932 2618 ntBASIC19.16■□□□□ 0.66
SMOQ99835 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMOQ99835 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 HCG4P8-203ENST00000443049 980 ntBASIC19.16■□□□□ 0.66
SMOQ99835 RN7SL606P-201ENST00000472779 293 ntBASIC19.16■□□□□ 0.66
SMOQ99835 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.16■□□□□ 0.66
SMOQ99835 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.16■□□□□ 0.66
SMOQ99835 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.16■□□□□ 0.66
SMOQ99835 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 LINC00602-201ENST00000629776 2065 ntBASIC19.16■□□□□ 0.66
SMOQ99835 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.16■□□□□ 0.66
SMOQ99835 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMOQ99835 PHGDH-209ENST00000641074 1780 ntBASIC19.16■□□□□ 0.66
SMOQ99835 LINC00167-201ENST00000530583 1419 ntBASIC19.16■□□□□ 0.66
SMOQ99835 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.15■□□□□ 0.66
SMOQ99835 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
SMOQ99835 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.15■□□□□ 0.66
SMOQ99835 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.15■□□□□ 0.66
SMOQ99835 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.15■□□□□ 0.66
SMOQ99835 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 IGHV3-41-201ENST00000613121 348 ntBASIC19.15■□□□□ 0.66
SMOQ99835 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.15■□□□□ 0.66
SMOQ99835 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SMOQ99835 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 KRT18P1-202ENST00000452408 1331 ntBASIC19.15■□□□□ 0.66
SMOQ99835 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMOQ99835 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.14■□□□□ 0.66
SMOQ99835 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SMOQ99835 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMOQ99835 AC009113.1-201ENST00000570267 2443 ntBASIC19.14■□□□□ 0.66
SMOQ99835 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SMOQ99835 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SMOQ99835 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SMOQ99835 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.14■□□□□ 0.65
SMOQ99835 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.14■□□□□ 0.65
SMOQ99835 TPSP2-201ENST00000561760 610 ntBASIC19.14■□□□□ 0.65
SMOQ99835 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
SMOQ99835 AC090616.6-201ENST00000582640 721 ntBASIC19.14■□□□□ 0.65
SMOQ99835 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 AC090164.3-201ENST00000610780 2143 ntBASIC19.14■□□□□ 0.65
SMOQ99835 AL592071.1-201ENST00000611956 408 ntBASIC19.14■□□□□ 0.65
SMOQ99835 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.14■□□□□ 0.65
SMOQ99835 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMOQ99835 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMOQ99835 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SMOQ99835 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SMOQ99835 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.13■□□□□ 0.65
SMOQ99835 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.13■□□□□ 0.65
SMOQ99835 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMOQ99835 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.13■□□□□ 0.65
SMOQ99835 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms