Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.46■□□□□ 0.23
SPENQ96T58 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.46■□□□□ 0.23
SPENQ96T58 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SPENQ96T58 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.46■□□□□ 0.23
SPENQ96T58 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPENQ96T58 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SPENQ96T58 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.46■□□□□ 0.22
SPENQ96T58 SCARNA2-201ENST00000458748 420 ntBASIC16.46■□□□□ 0.22
SPENQ96T58 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.46■□□□□ 0.22
SPENQ96T58 AC093909.1-201ENST00000504731 1122 ntBASIC16.46■□□□□ 0.22
SPENQ96T58 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.46■□□□□ 0.22
SPENQ96T58 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
SPENQ96T58 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SPENQ96T58 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
SPENQ96T58 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 UPF3AP3-201ENST00000420996 769 ntBASIC16.45■□□□□ 0.22
SPENQ96T58 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.45■□□□□ 0.22
SPENQ96T58 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.45■□□□□ 0.22
SPENQ96T58 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SPENQ96T58 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SPENQ96T58 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SPENQ96T58 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
SPENQ96T58 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
SPENQ96T58 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.45■□□□□ 0.22
SPENQ96T58 MIR3197-201ENST00000582241 73 ntBASIC16.45■□□□□ 0.22
SPENQ96T58 LINC01711-201ENST00000598340 967 ntBASIC16.45■□□□□ 0.22
SPENQ96T58 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.45■□□□□ 0.22
SPENQ96T58 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.45■□□□□ 0.22
SPENQ96T58 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.45■□□□□ 0.22
SPENQ96T58 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SPENQ96T58 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.45■□□□□ 0.22
SPENQ96T58 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 KRT18P3-201ENST00000451602 1288 ntBASIC16.44■□□□□ 0.22
SPENQ96T58 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.44■□□□□ 0.22
SPENQ96T58 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.44■□□□□ 0.22
SPENQ96T58 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.44■□□□□ 0.22
SPENQ96T58 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 ZNF259P1-201ENST00000407656 1365 ntBASIC16.44■□□□□ 0.22
SPENQ96T58 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.44■□□□□ 0.22
SPENQ96T58 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SPENQ96T58 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.44■□□□□ 0.22
SPENQ96T58 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.44■□□□□ 0.22
SPENQ96T58 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SPENQ96T58 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.44■□□□□ 0.22
SPENQ96T58 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
SPENQ96T58 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SPENQ96T58 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.44■□□□□ 0.22
SPENQ96T58 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SPENQ96T58 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.43■□□□□ 0.22
SPENQ96T58 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
SPENQ96T58 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 CYMP-203ENST00000474680 1263 ntBASIC16.43■□□□□ 0.22
SPENQ96T58 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SPENQ96T58 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.43■□□□□ 0.22
SPENQ96T58 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SPENQ96T58 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.43■□□□□ 0.22
SPENQ96T58 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.43■□□□□ 0.22
SPENQ96T58 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SPENQ96T58 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.43■□□□□ 0.22
SPENQ96T58 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SPENQ96T58 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SPENQ96T58 RPS2P28-201ENST00000314255 741 ntBASIC16.42■□□□□ 0.22
SPENQ96T58 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms