Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AC024563.2-201ENST00000603282 481 ntBASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AL078644.1-201ENST00000609881 752 ntBASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSMD1Q96PZ7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 LINC01521-201ENST00000504184 1943 ntBASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AL353692.3-201ENST00000407031 1396 ntBASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AL512353.2-201ENST00000448759 1962 ntBASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AF228730.6-201ENST00000641497 218 ntBASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AC084121.3-201ENST00000641716 218 ntBASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AC105233.6-201ENST00000642093 218 ntBASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSMD1Q96PZ7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 AC002310.6-201ENST00000624451 1377 ntBASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 ELL2P1-201ENST00000413990 1906 ntBASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 GAPDHP21-201ENST00000450301 1010 ntBASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 KRT8P7-201ENST00000533003 1432 ntBASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.52■□□□□ 0.08
CSMD1Q96PZ7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 AC005225.4-201ENST00000557330 545 ntBASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 AC092865.6-201ENST00000642101 219 ntBASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.52■□□□□ 0.07
CSMD1Q96PZ7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CSMD1Q96PZ7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms