Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.68■□□□□ 0.9
USP6NLQ92738 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.68■□□□□ 0.9
USP6NLQ92738 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.68■□□□□ 0.9
USP6NLQ92738 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.68■□□□□ 0.9
USP6NLQ92738 SART3-203ENST00000546611 1184 ntBASIC20.68■□□□□ 0.9
USP6NLQ92738 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.68■□□□□ 0.9
USP6NLQ92738 AC055717.3-201ENST00000622967 595 ntBASIC20.68■□□□□ 0.9
USP6NLQ92738 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP6NLQ92738 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 AFG3L1P-217ENST00000557444 2447 ntBASIC20.68■□□□□ 0.9
USP6NLQ92738 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
USP6NLQ92738 AC125634.1-201ENST00000438758 1403 ntBASIC20.68■□□□□ 0.9
USP6NLQ92738 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP6NLQ92738 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP6NLQ92738 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
USP6NLQ92738 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.67■□□□□ 0.9
USP6NLQ92738 AC034105.1-201ENST00000563488 319 ntBASIC20.67■□□□□ 0.9
USP6NLQ92738 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
USP6NLQ92738 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 AC009102.3-201ENST00000623118 1491 ntBASIC20.67■□□□□ 0.9
USP6NLQ92738 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.67■□□□□ 0.9
USP6NLQ92738 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USP6NLQ92738 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP6NLQ92738 AL024508.2-201ENST00000607749 1894 ntBASIC20.67■□□□□ 0.9
USP6NLQ92738 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6NLQ92738 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
USP6NLQ92738 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6NLQ92738 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6NLQ92738 MTCL1P1-201ENST00000446207 792 ntBASIC20.66■□□□□ 0.9
USP6NLQ92738 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.66■□□□□ 0.9
USP6NLQ92738 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.66■□□□□ 0.9
USP6NLQ92738 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6NLQ92738 AC027601.4-201ENST00000611259 610 ntBASIC20.66■□□□□ 0.9
USP6NLQ92738 AC009154.2-201ENST00000621177 724 ntBASIC20.66■□□□□ 0.9
USP6NLQ92738 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6NLQ92738 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.66■□□□□ 0.9
USP6NLQ92738 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 AC104109.2-201ENST00000602919 1418 ntBASIC20.66■□□□□ 0.9
USP6NLQ92738 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6NLQ92738 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6NLQ92738 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.66■□□□□ 0.9
USP6NLQ92738 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.66■□□□□ 0.9
USP6NLQ92738 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
USP6NLQ92738 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP6NLQ92738 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
USP6NLQ92738 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP6NLQ92738 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.65■□□□□ 0.9
USP6NLQ92738 ABCD1P5-201ENST00000445663 754 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms