Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 AP000593.1-201ENST00000393668 712 ntBASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 CRYGFP-201ENST00000418459 633 ntBASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 CKBP1-201ENST00000565489 1086 ntBASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 AP000525.1-201ENST00000608286 694 ntBASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 GNAS-203ENST00000306120 1878 ntBASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCHCR1Q8TD31 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 AC096733.2-201ENST00000609937 1394 ntBASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 AC138028.4-201ENST00000564984 1845 ntBASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCHCR1Q8TD31 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 MIR1238-201ENST00000408483 83 ntBASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 MFAP1P1-201ENST00000442257 1255 ntBASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 AP005242.2-201ENST00000580065 1175 ntBASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCHCR1Q8TD31 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 ESPNP-201ENST00000270691 2015 ntBASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.08■□□□□ 0.65
CCHCR1Q8TD31 MMP23A-201ENST00000234610 1017 ntBASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 BX088651.1-201ENST00000540551 451 ntBASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 FITM1-202ENST00000559294 800 ntBASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCHCR1Q8TD31 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms