Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
ARHGEF28Q8N1W1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 HNRNPDP1-201ENST00000439535 754 ntBASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 AF186996.4-201ENST00000467186 377 ntBASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 PMS2P1-201ENST00000431037 1228 ntBASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 MOK-208ENST00000519058 917 ntTSL 2 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 PAN3-AS1-201ENST00000563843 1351 ntBASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
ARHGEF28Q8N1W1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 AC126763.1-201ENST00000552015 2118 ntBASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 SCARNA2-201ENST00000458748 420 ntBASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 AC073648.2-201ENST00000510116 352 ntBASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC25.25■■□□□ 1.63
ARHGEF28Q8N1W1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 AC145285.3-201ENST00000564603 959 ntBASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 AL139288.1-201ENST00000623748 933 ntBASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC25.24■■□□□ 1.63
ARHGEF28Q8N1W1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 AL590627.1-203ENST00000421194 1026 ntBASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 AC007967.3-201ENST00000434308 558 ntBASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 ABCD1P5-201ENST00000445663 754 ntBASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 AP005117.1-201ENST00000584346 1413 ntBASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 IGHV3-22-201ENST00000520721 359 ntBASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC25.23■■□□□ 1.63
ARHGEF28Q8N1W1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF28Q8N1W1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF28Q8N1W1 GMCL1P1-201ENST00000463439 1581 ntBASIC25.22■■□□□ 1.63
ARHGEF28Q8N1W1 AC010460.3-201ENST00000511359 1579 ntBASIC25.22■■□□□ 1.63
ARHGEF28Q8N1W1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF28Q8N1W1 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
ARHGEF28Q8N1W1 AC139887.3-201ENST00000568585 713 ntBASIC25.22■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms