Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 AC112698.1-201ENST00000510299 916 ntBASIC22.22■■□□□ 1.15
SLX4Q8IY92 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 AC073621.1-201ENST00000392730 636 ntBASIC22.22■■□□□ 1.15
SLX4Q8IY92 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SLX4Q8IY92 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.22■■□□□ 1.15
SLX4Q8IY92 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SLX4Q8IY92 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.21■■□□□ 1.15
SLX4Q8IY92 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.15
SLX4Q8IY92 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.15
SLX4Q8IY92 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 LINC00602-201ENST00000629776 2065 ntBASIC22.2■■□□□ 1.14
SLX4Q8IY92 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 AL032819.2-201ENST00000624543 2162 ntBASIC22.2■■□□□ 1.14
SLX4Q8IY92 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SLX4Q8IY92 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 KRT18P65-201ENST00000439811 1286 ntBASIC22.2■■□□□ 1.14
SLX4Q8IY92 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
SLX4Q8IY92 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.19■■□□□ 1.14
SLX4Q8IY92 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SLX4Q8IY92 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.19■■□□□ 1.14
SLX4Q8IY92 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SLX4Q8IY92 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 KRT18P2-201ENST00000447938 1258 ntBASIC22.18■■□□□ 1.14
SLX4Q8IY92 AC108751.1-201ENST00000490852 363 ntBASIC22.18■■□□□ 1.14
SLX4Q8IY92 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.18■■□□□ 1.14
SLX4Q8IY92 MTDHP5-201ENST00000598980 586 ntBASIC22.18■■□□□ 1.14
SLX4Q8IY92 MYLKP1-201ENST00000509077 1580 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms