Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRIM42Q8IWZ5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.28■□□□□ 0.52
TRIM42Q8IWZ5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.27■□□□□ 0.52
TRIM42Q8IWZ5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM42Q8IWZ5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TRIM42Q8IWZ5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM42Q8IWZ5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM42Q8IWZ5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM42Q8IWZ5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRIM42Q8IWZ5 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 GMCL1P1-201ENST00000463439 1581 ntBASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 AP000593.1-201ENST00000393668 712 ntBASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 RCC2P3-201ENST00000418112 1537 ntBASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRIM42Q8IWZ5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRIM42Q8IWZ5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms