Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 AL691403.2-201ENST00000618460 490 ntBASIC19.4■□□□□ 0.7
RNF135Q8IUD6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.4■□□□□ 0.7
RNF135Q8IUD6 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF135Q8IUD6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF135Q8IUD6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF135Q8IUD6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 NUS1P2-201ENST00000417358 873 ntBASIC19.39■□□□□ 0.69
RNF135Q8IUD6 KRT18P67-201ENST00000432816 1264 ntBASIC19.39■□□□□ 0.69
RNF135Q8IUD6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 AC093909.1-201ENST00000504731 1122 ntBASIC19.39■□□□□ 0.69
RNF135Q8IUD6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 AL390719.2-201ENST00000606993 987 ntBASIC19.39■□□□□ 0.69
RNF135Q8IUD6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.39■□□□□ 0.69
RNF135Q8IUD6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF135Q8IUD6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 MCCD1P1-208ENST00000445732 328 ntBASIC19.38■□□□□ 0.69
RNF135Q8IUD6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 AP003733.1-201ENST00000491725 852 ntBASIC19.38■□□□□ 0.69
RNF135Q8IUD6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.38■□□□□ 0.69
RNF135Q8IUD6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 AC148477.8-201ENST00000624298 468 ntBASIC19.38■□□□□ 0.69
RNF135Q8IUD6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF135Q8IUD6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 AC243591.1-201ENST00000452967 1364 ntBASIC19.37■□□□□ 0.69
RNF135Q8IUD6 AF186996.4-201ENST00000467186 377 ntBASIC19.37■□□□□ 0.69
RNF135Q8IUD6 AC073648.2-201ENST00000510116 352 ntBASIC19.37■□□□□ 0.69
RNF135Q8IUD6 AC009065.1-201ENST00000564055 1225 ntBASIC19.37■□□□□ 0.69
RNF135Q8IUD6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.37■□□□□ 0.69
RNF135Q8IUD6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.37■□□□□ 0.69
RNF135Q8IUD6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF135Q8IUD6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF135Q8IUD6 NSUN5P1-202ENST00000421140 1535 ntBASIC19.36■□□□□ 0.69
RNF135Q8IUD6 NSUN5P2-203ENST00000457352 1529 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms