Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM1Q5H8C1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM1Q5H8C1 AL390719.2-201ENST00000606993 987 ntBASIC16.07■□□□□ 0.16
FREM1Q5H8C1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.07■□□□□ 0.16
FREM1Q5H8C1 AC135776.1-201ENST00000319817 2481 ntBASIC16.07■□□□□ 0.16
FREM1Q5H8C1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FREM1Q5H8C1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
FREM1Q5H8C1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 KRT8P26-201ENST00000534154 1276 ntBASIC16.06■□□□□ 0.16
FREM1Q5H8C1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 AL353692.3-201ENST00000407031 1396 ntBASIC16.06■□□□□ 0.16
FREM1Q5H8C1 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
FREM1Q5H8C1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.05■□□□□ 0.16
FREM1Q5H8C1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.05■□□□□ 0.16
FREM1Q5H8C1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AC074051.2-201ENST00000565115 352 ntBASIC16.04■□□□□ 0.16
FREM1Q5H8C1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AC005336.2-201ENST00000593183 939 ntBASIC16.04■□□□□ 0.16
FREM1Q5H8C1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AL732292.2-201ENST00000609649 430 ntBASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AL592071.1-201ENST00000611956 408 ntBASIC16.04■□□□□ 0.16
FREM1Q5H8C1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.04■□□□□ 0.16
FREM1Q5H8C1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 AC233702.3-201ENST00000578656 1387 ntBASIC16.04■□□□□ 0.16
FREM1Q5H8C1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.04■□□□□ 0.16
FREM1Q5H8C1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
FREM1Q5H8C1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms