Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRA2BP62995 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.28■□□□□ 0.36
TRA2BP62995 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 COX11P1-201ENST00000489116 835 ntBASIC17.28■□□□□ 0.36
TRA2BP62995 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 AC010203.1-204ENST00000548782 407 ntBASIC17.28■□□□□ 0.36
TRA2BP62995 GCSHP2-201ENST00000560971 527 ntBASIC17.28■□□□□ 0.36
TRA2BP62995 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRA2BP62995 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.28■□□□□ 0.36
TRA2BP62995 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRA2BP62995 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TRA2BP62995 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRA2BP62995 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRA2BP62995 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.27■□□□□ 0.36
TRA2BP62995 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 AL137013.1-201ENST00000432946 1228 ntBASIC17.27■□□□□ 0.36
TRA2BP62995 BX664615.1-201ENST00000443558 458 ntBASIC17.27■□□□□ 0.36
TRA2BP62995 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.27■□□□□ 0.36
TRA2BP62995 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.27■□□□□ 0.36
TRA2BP62995 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRA2BP62995 AL157888.1-201ENST00000631930 593 ntBASIC17.27■□□□□ 0.36
TRA2BP62995 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRA2BP62995 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRA2BP62995 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRA2BP62995 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRA2BP62995 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRA2BP62995 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.27■□□□□ 0.35
TRA2BP62995 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRA2BP62995 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRA2BP62995 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.26■□□□□ 0.35
TRA2BP62995 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRA2BP62995 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.26■□□□□ 0.35
TRA2BP62995 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRA2BP62995 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.26■□□□□ 0.35
TRA2BP62995 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.26■□□□□ 0.35
TRA2BP62995 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.26■□□□□ 0.35
TRA2BP62995 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.26■□□□□ 0.35
TRA2BP62995 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRA2BP62995 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
TRA2BP62995 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.26■□□□□ 0.35
TRA2BP62995 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRA2BP62995 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRA2BP62995 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.26■□□□□ 0.35
TRA2BP62995 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRA2BP62995 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
TRA2BP62995 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRA2BP62995 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.25■□□□□ 0.35
TRA2BP62995 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.25■□□□□ 0.35
TRA2BP62995 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.25■□□□□ 0.35
TRA2BP62995 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.25■□□□□ 0.35
TRA2BP62995 AC073508.3-201ENST00000619697 1419 ntBASIC17.25■□□□□ 0.35
TRA2BP62995 TERF1P1-201ENST00000311003 1181 ntBASIC17.25■□□□□ 0.35
TRA2BP62995 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRA2BP62995 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.25■□□□□ 0.35
TRA2BP62995 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms