Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.56■□□□□ 0.88
EPHB4P54760 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EPHB4P54760 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
EPHB4P54760 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.56■□□□□ 0.88
EPHB4P54760 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 AC233702.3-201ENST00000578656 1387 ntBASIC20.56■□□□□ 0.88
EPHB4P54760 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
EPHB4P54760 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EPHB4P54760 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
EPHB4P54760 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
EPHB4P54760 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
EPHB4P54760 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.55■□□□□ 0.88
EPHB4P54760 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
EPHB4P54760 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHB4P54760 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.55■□□□□ 0.88
EPHB4P54760 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 MIR3180-5-201ENST00000583743 153 ntBASIC20.55■□□□□ 0.88
EPHB4P54760 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
EPHB4P54760 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.55■□□□□ 0.88
EPHB4P54760 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.55■□□□□ 0.88
EPHB4P54760 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.55■□□□□ 0.88
EPHB4P54760 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EPHB4P54760 CROCCP3-202ENST00000420820 1947 ntBASIC20.55■□□□□ 0.88
EPHB4P54760 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
EPHB4P54760 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.54■□□□□ 0.88
EPHB4P54760 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHB4P54760 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHB4P54760 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHB4P54760 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHB4P54760 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.54■□□□□ 0.88
EPHB4P54760 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.54■□□□□ 0.88
EPHB4P54760 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.54■□□□□ 0.88
EPHB4P54760 AC112497.1-201ENST00000624824 639 ntBASIC20.54■□□□□ 0.88
EPHB4P54760 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EPHB4P54760 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EPHB4P54760 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
EPHB4P54760 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
EPHB4P54760 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
EPHB4P54760 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
EPHB4P54760 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.53■□□□□ 0.88
EPHB4P54760 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 IGHV3-47-201ENST00000425060 335 ntBASIC20.53■□□□□ 0.88
EPHB4P54760 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.53■□□□□ 0.88
EPHB4P54760 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.53■□□□□ 0.88
EPHB4P54760 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.53■□□□□ 0.88
EPHB4P54760 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.53■□□□□ 0.88
EPHB4P54760 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
EPHB4P54760 AC005332.3-201ENST00000589904 676 ntBASIC20.53■□□□□ 0.88
EPHB4P54760 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 AC104417.2-201ENST00000562989 1793 ntBASIC20.53■□□□□ 0.88
EPHB4P54760 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
EPHB4P54760 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EPHB4P54760 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
EPHB4P54760 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms