Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF4P48230 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF4P48230 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TM4SF4P48230 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.81■□□□□ 0.92
TM4SF4P48230 CEND1P1-201ENST00000451006 455 ntBASIC20.81■□□□□ 0.92
TM4SF4P48230 AC112698.1-201ENST00000510299 916 ntBASIC20.81■□□□□ 0.92
TM4SF4P48230 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.81■□□□□ 0.92
TM4SF4P48230 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF4P48230 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.81■□□□□ 0.92
TM4SF4P48230 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.81■□□□□ 0.92
TM4SF4P48230 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.81■□□□□ 0.92
TM4SF4P48230 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TM4SF4P48230 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TM4SF4P48230 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.8■□□□□ 0.92
TM4SF4P48230 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.8■□□□□ 0.92
TM4SF4P48230 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.8■□□□□ 0.92
TM4SF4P48230 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 BCRP1-201ENST00000444246 691 ntBASIC20.8■□□□□ 0.92
TM4SF4P48230 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.8■□□□□ 0.92
TM4SF4P48230 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.8■□□□□ 0.92
TM4SF4P48230 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.8■□□□□ 0.92
TM4SF4P48230 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.8■□□□□ 0.92
TM4SF4P48230 AC027612.4-201ENST00000605371 583 ntBASIC20.8■□□□□ 0.92
TM4SF4P48230 AL513190.1-201ENST00000621254 727 ntBASIC20.8■□□□□ 0.92
TM4SF4P48230 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.8■□□□□ 0.92
TM4SF4P48230 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TM4SF4P48230 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.79■□□□□ 0.92
TM4SF4P48230 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF4P48230 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TM4SF4P48230 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF4P48230 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF4P48230 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.79■□□□□ 0.92
TM4SF4P48230 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.79■□□□□ 0.92
TM4SF4P48230 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.79■□□□□ 0.92
TM4SF4P48230 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.79■□□□□ 0.92
TM4SF4P48230 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TM4SF4P48230 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TM4SF4P48230 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TM4SF4P48230 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.79■□□□□ 0.92
TM4SF4P48230 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF4P48230 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF4P48230 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.78■□□□□ 0.92
TM4SF4P48230 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.78■□□□□ 0.92
TM4SF4P48230 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF4P48230 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.78■□□□□ 0.92
TM4SF4P48230 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.78■□□□□ 0.92
TM4SF4P48230 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TM4SF4P48230 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.78■□□□□ 0.92
TM4SF4P48230 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.78■□□□□ 0.92
TM4SF4P48230 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF4P48230 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.78■□□□□ 0.92
TM4SF4P48230 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF4P48230 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TM4SF4P48230 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TM4SF4P48230 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
TM4SF4P48230 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TM4SF4P48230 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TM4SF4P48230 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.77■□□□□ 0.92
TM4SF4P48230 VN2R19P-201ENST00000442399 1052 ntBASIC20.77■□□□□ 0.92
TM4SF4P48230 HCG4B-203ENST00000450128 991 ntBASIC20.77■□□□□ 0.92
TM4SF4P48230 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.77■□□□□ 0.92
TM4SF4P48230 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.77■□□□□ 0.92
TM4SF4P48230 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.77■□□□□ 0.92
TM4SF4P48230 AL078644.1-201ENST00000609881 752 ntBASIC20.77■□□□□ 0.92
TM4SF4P48230 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TM4SF4P48230 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TM4SF4P48230 SIGLEC16-201ENST00000599858 1437 ntBASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms