Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RFC4P35249 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.95■■□□□ 1.26
RFC4P35249 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.95■■□□□ 1.26
RFC4P35249 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.95■■□□□ 1.26
RFC4P35249 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.95■■□□□ 1.26
RFC4P35249 AC105339.3-201ENST00000560043 636 ntBASIC22.95■■□□□ 1.26
RFC4P35249 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RFC4P35249 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC22.95■■□□□ 1.26
RFC4P35249 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
RFC4P35249 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
RFC4P35249 LINC00602-201ENST00000629776 2065 ntBASIC22.95■■□□□ 1.26
RFC4P35249 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.95■■□□□ 1.26
RFC4P35249 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.94■■□□□ 1.26
RFC4P35249 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 CENPM-204ENST00000402420 688 ntTSL 5 BASIC22.94■■□□□ 1.26
RFC4P35249 AC004967.1-201ENST00000453589 447 ntBASIC22.94■■□□□ 1.26
RFC4P35249 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.94■■□□□ 1.26
RFC4P35249 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 RNA5SP416-201ENST00000516838 111 ntBASIC22.94■■□□□ 1.26
RFC4P35249 UNC93B6-202ENST00000528242 690 ntBASIC22.94■■□□□ 1.26
RFC4P35249 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.94■■□□□ 1.26
RFC4P35249 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.94■■□□□ 1.26
RFC4P35249 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.94■■□□□ 1.26
RFC4P35249 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 MTDHP4-201ENST00000600287 670 ntBASIC22.94■■□□□ 1.26
RFC4P35249 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.94■■□□□ 1.26
RFC4P35249 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
RFC4P35249 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.94■■□□□ 1.26
RFC4P35249 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
RFC4P35249 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.93■■□□□ 1.26
RFC4P35249 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
RFC4P35249 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RFC4P35249 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.93■■□□□ 1.26
RFC4P35249 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RFC4P35249 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.93■■□□□ 1.26
RFC4P35249 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
RFC4P35249 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.93■■□□□ 1.26
RFC4P35249 NKAPP1-205ENST00000585790 367 ntBASIC22.93■■□□□ 1.26
RFC4P35249 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RFC4P35249 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
RFC4P35249 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RFC4P35249 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22.92■■□□□ 1.26
RFC4P35249 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22.92■■□□□ 1.26
RFC4P35249 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.92■■□□□ 1.26
RFC4P35249 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.92■■□□□ 1.26
RFC4P35249 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
RFC4P35249 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
RFC4P35249 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.92■■□□□ 1.26
RFC4P35249 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.92■■□□□ 1.26
RFC4P35249 LINC02084-201ENST00000606069 1096 ntBASIC22.92■■□□□ 1.26
RFC4P35249 AC107918.4-202ENST00000641623 219 ntBASIC22.92■■□□□ 1.26
RFC4P35249 AC134684.3-201ENST00000641758 218 ntBASIC22.92■■□□□ 1.26
RFC4P35249 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.92■■□□□ 1.26
RFC4P35249 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RFC4P35249 AL158211.5-201ENST00000623583 2518 ntBASIC22.91■■□□□ 1.26
RFC4P35249 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.91■■□□□ 1.26
RFC4P35249 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.91■■□□□ 1.26
RFC4P35249 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
RFC4P35249 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC22.91■■□□□ 1.26
RFC4P35249 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
RFC4P35249 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.91■■□□□ 1.26
RFC4P35249 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms