Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A4P31645 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC6A4P31645 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A4P31645 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC6A4P31645 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A4P31645 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.76■□□□□ 0.59
SLC6A4P31645 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A4P31645 GMCL1P1-201ENST00000463439 1581 ntBASIC18.76■□□□□ 0.59
SLC6A4P31645 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A4P31645 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC6A4P31645 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC6A4P31645 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC6A4P31645 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 RN7SL606P-201ENST00000472779 293 ntBASIC18.75■□□□□ 0.59
SLC6A4P31645 AC090616.6-201ENST00000582640 721 ntBASIC18.75■□□□□ 0.59
SLC6A4P31645 AL592071.1-201ENST00000611956 408 ntBASIC18.75■□□□□ 0.59
SLC6A4P31645 IGHV3-41-201ENST00000613121 348 ntBASIC18.75■□□□□ 0.59
SLC6A4P31645 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SLC6A4P31645 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC6A4P31645 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC6A4P31645 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A4P31645 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 DRAXINP1-201ENST00000437611 948 ntBASIC18.74■□□□□ 0.59
SLC6A4P31645 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.74■□□□□ 0.59
SLC6A4P31645 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SLC6A4P31645 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 AC012313.10-201ENST00000623509 926 ntBASIC18.74■□□□□ 0.59
SLC6A4P31645 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.74■□□□□ 0.59
SLC6A4P31645 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC6A4P31645 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC6A4P31645 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SLC6A4P31645 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC6A4P31645 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC6A4P31645 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SLC6A4P31645 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
SLC6A4P31645 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC6A4P31645 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A4P31645 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC6A4P31645 AC008687.5-201ENST00000593746 558 ntBASIC18.73■□□□□ 0.59
SLC6A4P31645 CLEC4GP1-201ENST00000596555 870 ntBASIC18.73■□□□□ 0.59
SLC6A4P31645 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 AC124864.1-201ENST00000623408 392 ntBASIC18.73■□□□□ 0.59
SLC6A4P31645 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SLC6A4P31645 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 LINC00602-201ENST00000629776 2065 ntBASIC18.73■□□□□ 0.59
SLC6A4P31645 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SLC6A4P31645 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC6A4P31645 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A4P31645 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC6A4P31645 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms