Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
BCKDHBP21953 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 AL024508.2-201ENST00000607749 1894 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 RPS2P28-201ENST00000314255 741 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BCKDHBP21953 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.06■□□□□ 0.48
BCKDHBP21953 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 MTCL1P1-201ENST00000446207 792 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHBP21953 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.06■□□□□ 0.48
BCKDHBP21953 AC145285.3-201ENST00000564603 959 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHBP21953 AC140113.2-201ENST00000604370 208 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.06■□□□□ 0.48
BCKDHBP21953 AL691403.2-201ENST00000618460 490 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 AP005117.1-201ENST00000584346 1413 ntBASIC18.06■□□□□ 0.48
BCKDHBP21953 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
BCKDHBP21953 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
BCKDHBP21953 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BCKDHBP21953 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
BCKDHBP21953 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHBP21953 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHBP21953 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHBP21953 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHBP21953 AC092910.1-201ENST00000482027 1129 ntBASIC18.05■□□□□ 0.48
BCKDHBP21953 AC012640.2-201ENST00000561606 901 ntBASIC18.05■□□□□ 0.48
BCKDHBP21953 AC008687.5-201ENST00000593746 558 ntBASIC18.05■□□□□ 0.48
BCKDHBP21953 AC011467.2-201ENST00000598425 242 ntBASIC18.05■□□□□ 0.48
BCKDHBP21953 AL356488.2-201ENST00000602755 427 ntBASIC18.05■□□□□ 0.48
BCKDHBP21953 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHBP21953 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHBP21953 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BCKDHBP21953 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.05■□□□□ 0.48
BCKDHBP21953 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHBP21953 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
BCKDHBP21953 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.05■□□□□ 0.48
BCKDHBP21953 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 AIRN-201ENST00000601203 4374 ntBASIC18.04■□□□□ 0.48
BCKDHBP21953 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
BCKDHBP21953 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHBP21953 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 AC098831.1-202ENST00000438821 336 ntBASIC18.04■□□□□ 0.48
BCKDHBP21953 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHBP21953 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.04■□□□□ 0.48
BCKDHBP21953 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 AC027601.4-201ENST00000611259 610 ntBASIC18.04■□□□□ 0.48
BCKDHBP21953 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 SDHAP2-201ENST00000455183 2001 ntBASIC18.04■□□□□ 0.48
BCKDHBP21953 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
BCKDHBP21953 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
BCKDHBP21953 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.04■□□□□ 0.48
BCKDHBP21953 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms