Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMPD1P17405 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.34■□□□□ 0.85
SMPD1P17405 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMPD1P17405 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.34■□□□□ 0.85
SMPD1P17405 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.34■□□□□ 0.85
SMPD1P17405 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.34■□□□□ 0.85
SMPD1P17405 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMPD1P17405 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
SMPD1P17405 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SMPD1P17405 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
SMPD1P17405 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMPD1P17405 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SMPD1P17405 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD1P17405 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD1P17405 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD1P17405 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD1P17405 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
SMPD1P17405 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.33■□□□□ 0.85
SMPD1P17405 AC093909.1-201ENST00000504731 1122 ntBASIC20.33■□□□□ 0.85
SMPD1P17405 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.33■□□□□ 0.85
SMPD1P17405 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.33■□□□□ 0.85
SMPD1P17405 AC011467.2-201ENST00000598425 242 ntBASIC20.33■□□□□ 0.85
SMPD1P17405 FAM215A-202ENST00000632077 792 ntBASIC20.33■□□□□ 0.85
SMPD1P17405 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD1P17405 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMPD1P17405 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMPD1P17405 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMPD1P17405 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SMPD1P17405 AC116562.4-201ENST00000641316 2276 ntBASIC20.33■□□□□ 0.84
SMPD1P17405 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMPD1P17405 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.32■□□□□ 0.84
SMPD1P17405 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.32■□□□□ 0.84
SMPD1P17405 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.32■□□□□ 0.84
SMPD1P17405 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.32■□□□□ 0.84
SMPD1P17405 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.32■□□□□ 0.84
SMPD1P17405 AC073648.2-201ENST00000510116 352 ntBASIC20.32■□□□□ 0.84
SMPD1P17405 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.32■□□□□ 0.84
SMPD1P17405 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.32■□□□□ 0.84
SMPD1P17405 AC106730.1-201ENST00000566722 1090 ntBASIC20.32■□□□□ 0.84
SMPD1P17405 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.32■□□□□ 0.84
SMPD1P17405 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 AC117500.6-201ENST00000624871 588 ntBASIC20.32■□□□□ 0.84
SMPD1P17405 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SMPD1P17405 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SMPD1P17405 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMPD1P17405 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.32■□□□□ 0.84
SMPD1P17405 AC005082.1-201ENST00000413042 2259 ntBASIC20.32■□□□□ 0.84
SMPD1P17405 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.31■□□□□ 0.84
SMPD1P17405 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.31■□□□□ 0.84
SMPD1P17405 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 SCARNA2-201ENST00000458748 420 ntBASIC20.31■□□□□ 0.84
SMPD1P17405 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.31■□□□□ 0.84
SMPD1P17405 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.31■□□□□ 0.84
SMPD1P17405 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.31■□□□□ 0.84
SMPD1P17405 AC139887.3-201ENST00000568585 713 ntBASIC20.31■□□□□ 0.84
SMPD1P17405 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.31■□□□□ 0.84
SMPD1P17405 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SMPD1P17405 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.31■□□□□ 0.84
SMPD1P17405 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMPD1P17405 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.31■□□□□ 0.84
SMPD1P17405 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms