Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC31.93■■■□□ 2.7
TOP2AP11388 SNCG-201ENST00000348795 684 ntTSL 2 BASIC31.93■■■□□ 2.7
TOP2AP11388 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC31.93■■■□□ 2.7
TOP2AP11388 IMP4-203ENST00000409935 958 ntTSL 5 BASIC31.93■■■□□ 2.7
TOP2AP11388 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC31.93■■■□□ 2.7
TOP2AP11388 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC31.93■■■□□ 2.7
TOP2AP11388 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC31.93■■■□□ 2.7
TOP2AP11388 AP000867.4-201ENST00000641616 219 ntBASIC31.93■■■□□ 2.7
TOP2AP11388 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC31.93■■■□□ 2.7
TOP2AP11388 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
TOP2AP11388 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
TOP2AP11388 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
TOP2AP11388 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
TOP2AP11388 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
TOP2AP11388 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TOP2AP11388 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC31.92■■■□□ 2.7
TOP2AP11388 HS6ST1P1-201ENST00000481504 1234 ntBASIC31.92■■■□□ 2.7
TOP2AP11388 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC31.92■■■□□ 2.7
TOP2AP11388 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
TOP2AP11388 CAND2-206ENST00000626378 333 ntTSL 5 BASIC31.92■■■□□ 2.7
TOP2AP11388 AC079776.2-201ENST00000641154 1609 ntBASIC31.92■■■□□ 2.7
TOP2AP11388 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
TOP2AP11388 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 NKAPP1-205ENST00000585790 367 ntBASIC31.91■■■□□ 2.7
TOP2AP11388 AL691403.2-201ENST00000618460 490 ntBASIC31.91■■■□□ 2.7
TOP2AP11388 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC31.91■■■□□ 2.7
TOP2AP11388 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
TOP2AP11388 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC31.91■■■□□ 2.7
TOP2AP11388 AC132938.6-201ENST00000623828 1655 ntBASIC31.91■■■□□ 2.7
TOP2AP11388 AC007952.6-201ENST00000573168 2673 ntBASIC31.91■■■□□ 2.7
TOP2AP11388 AC003957.1-201ENST00000625108 2673 ntBASIC31.91■■■□□ 2.7
TOP2AP11388 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC31.91■■■□□ 2.7
TOP2AP11388 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
TOP2AP11388 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC31.9■■■□□ 2.7
TOP2AP11388 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC31.9■■■□□ 2.7
TOP2AP11388 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
TOP2AP11388 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC31.9■■■□□ 2.7
TOP2AP11388 COBL-210ENST00000632460 1941 ntTSL 5 BASIC31.9■■■□□ 2.7
TOP2AP11388 SOD2-201ENST00000337404 991 ntTSL 2 BASIC31.9■■■□□ 2.7
TOP2AP11388 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC31.9■■■□□ 2.7
TOP2AP11388 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
TOP2AP11388 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC31.89■■■□□ 2.7
TOP2AP11388 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TOP2AP11388 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TOP2AP11388 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC31.89■■■□□ 2.7
TOP2AP11388 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC31.89■■■□□ 2.7
TOP2AP11388 UNC93B6-202ENST00000528242 690 ntBASIC31.89■■■□□ 2.7
TOP2AP11388 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC31.89■■■□□ 2.7
TOP2AP11388 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
TOP2AP11388 ETFA-208ENST00000559602 792 ntTSL 3 BASIC31.89■■■□□ 2.7
TOP2AP11388 AC040169.1-201ENST00000565382 521 ntBASIC31.89■■■□□ 2.7
TOP2AP11388 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC31.89■■■□□ 2.7
TOP2AP11388 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
TOP2AP11388 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
TOP2AP11388 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
TOP2AP11388 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC31.88■■■□□ 2.69
TOP2AP11388 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TOP2AP11388 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
TOP2AP11388 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC31.88■■■□□ 2.69
TOP2AP11388 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TOP2AP11388 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC31.88■■■□□ 2.69
TOP2AP11388 AC004832.2-201ENST00000426397 482 ntBASIC31.88■■■□□ 2.69
TOP2AP11388 HMGN1P19-201ENST00000436976 333 ntBASIC31.88■■■□□ 2.69
TOP2AP11388 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC31.88■■■□□ 2.69
TOP2AP11388 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC31.88■■■□□ 2.69
TOP2AP11388 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC31.88■■■□□ 2.69
TOP2AP11388 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TOP2AP11388 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC31.87■■■□□ 2.69
TOP2AP11388 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TOP2AP11388 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC31.87■■■□□ 2.69
TOP2AP11388 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC31.87■■■□□ 2.69
TOP2AP11388 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TOP2AP11388 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC31.87■■■□□ 2.69
TOP2AP11388 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TOP2AP11388 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TOP2AP11388 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC31.87■■■□□ 2.69
TOP2AP11388 FIS1-203ENST00000442303 631 ntTSL 3 BASIC31.87■■■□□ 2.69
TOP2AP11388 AC009947.1-201ENST00000444350 727 ntBASIC31.87■■■□□ 2.69
TOP2AP11388 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC31.87■■■□□ 2.69
TOP2AP11388 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC31.87■■■□□ 2.69
TOP2AP11388 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC31.87■■■□□ 2.69
TOP2AP11388 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC31.87■■■□□ 2.69
TOP2AP11388 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
TOP2AP11388 KRT8P47-201ENST00000604727 1398 ntBASIC31.86■■■□□ 2.69
TOP2AP11388 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TOP2AP11388 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms