Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
RETP07949 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 ZNF259P1-201ENST00000407656 1365 ntBASIC18.45■□□□□ 0.54
RETP07949 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.45■□□□□ 0.54
RETP07949 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.45■□□□□ 0.54
RETP07949 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.45■□□□□ 0.54
RETP07949 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 MIR940-201ENST00000401276 94 ntBASIC18.45■□□□□ 0.54
RETP07949 POM121L3P-201ENST00000419331 1163 ntBASIC18.45■□□□□ 0.54
RETP07949 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.45■□□□□ 0.54
RETP07949 AC009065.1-201ENST00000564055 1225 ntBASIC18.45■□□□□ 0.54
RETP07949 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.45■□□□□ 0.54
RETP07949 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RETP07949 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.45■□□□□ 0.54
RETP07949 AC010240.3-201ENST00000607688 395 ntBASIC18.45■□□□□ 0.54
RETP07949 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.45■□□□□ 0.54
RETP07949 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RETP07949 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RETP07949 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.45■□□□□ 0.54
RETP07949 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.44■□□□□ 0.54
RETP07949 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
RETP07949 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RETP07949 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.44■□□□□ 0.54
RETP07949 RPL13AP23-201ENST00000480739 586 ntBASIC18.44■□□□□ 0.54
RETP07949 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.44■□□□□ 0.54
RETP07949 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.44■□□□□ 0.54
RETP07949 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.44■□□□□ 0.54
RETP07949 AC104390.1-201ENST00000555663 520 ntBASIC18.44■□□□□ 0.54
RETP07949 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.44■□□□□ 0.54
RETP07949 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 AL691403.2-201ENST00000618460 490 ntBASIC18.44■□□□□ 0.54
RETP07949 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RETP07949 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RETP07949 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.44■□□□□ 0.54
RETP07949 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RETP07949 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RETP07949 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.43■□□□□ 0.54
RETP07949 AC243591.1-201ENST00000452967 1364 ntBASIC18.43■□□□□ 0.54
RETP07949 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.43■□□□□ 0.54
RETP07949 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.43■□□□□ 0.54
RETP07949 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RETP07949 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 KRT8P3-201ENST00000519669 1449 ntBASIC18.43■□□□□ 0.54
RETP07949 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RETP07949 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.43■□□□□ 0.54
RETP07949 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
RETP07949 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.43■□□□□ 0.54
RETP07949 KRT18P23-201ENST00000435622 1283 ntBASIC18.43■□□□□ 0.54
RETP07949 MINOS1P3-201ENST00000457048 203 ntBASIC18.43■□□□□ 0.54
RETP07949 RN7SL606P-201ENST00000472779 293 ntBASIC18.43■□□□□ 0.54
RETP07949 LINC02084-201ENST00000606069 1096 ntBASIC18.43■□□□□ 0.54
RETP07949 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.43■□□□□ 0.54
RETP07949 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.43■□□□□ 0.54
RETP07949 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
RETP07949 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RETP07949 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
RETP07949 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.42■□□□□ 0.54
RETP07949 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RETP07949 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
RETP07949 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RETP07949 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.42■□□□□ 0.54
RETP07949 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.42■□□□□ 0.54
RETP07949 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RETP07949 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RETP07949 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.42■□□□□ 0.54
RETP07949 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms