Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MBD4O95243 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.81■■□□□ 1.08
MBD4O95243 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MBD4O95243 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.81■■□□□ 1.08
MBD4O95243 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.81■■□□□ 1.08
MBD4O95243 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.81■■□□□ 1.08
MBD4O95243 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.81■■□□□ 1.08
MBD4O95243 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.81■■□□□ 1.08
MBD4O95243 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.81■■□□□ 1.08
MBD4O95243 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD4O95243 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.8■■□□□ 1.08
MBD4O95243 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.8■■□□□ 1.08
MBD4O95243 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
MBD4O95243 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.8■■□□□ 1.08
MBD4O95243 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.8■■□□□ 1.08
MBD4O95243 TPSP2-201ENST00000561760 610 ntBASIC21.8■■□□□ 1.08
MBD4O95243 AC008687.5-201ENST00000593746 558 ntBASIC21.8■■□□□ 1.08
MBD4O95243 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 AC092329.2-201ENST00000598402 547 ntBASIC21.8■■□□□ 1.08
MBD4O95243 AL592071.1-201ENST00000611956 408 ntBASIC21.8■■□□□ 1.08
MBD4O95243 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
MBD4O95243 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD4O95243 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
MBD4O95243 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.79■■□□□ 1.08
MBD4O95243 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.79■■□□□ 1.08
MBD4O95243 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.79■■□□□ 1.08
MBD4O95243 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
MBD4O95243 IGHV3-41-201ENST00000613121 348 ntBASIC21.79■■□□□ 1.08
MBD4O95243 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
MBD4O95243 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
MBD4O95243 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.79■■□□□ 1.08
MBD4O95243 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
MBD4O95243 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MBD4O95243 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD4O95243 LINC00602-201ENST00000629776 2065 ntBASIC21.78■■□□□ 1.08
MBD4O95243 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
MBD4O95243 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.78■■□□□ 1.08
MBD4O95243 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MBD4O95243 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD4O95243 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD4O95243 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.78■■□□□ 1.08
MBD4O95243 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.78■■□□□ 1.08
MBD4O95243 AC090616.6-201ENST00000582640 721 ntBASIC21.78■■□□□ 1.08
MBD4O95243 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
MBD4O95243 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD4O95243 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD4O95243 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD4O95243 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.77■■□□□ 1.08
MBD4O95243 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MBD4O95243 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms