Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC28A2O43868 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SLC28A2O43868 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC28A2O43868 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC28A2O43868 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC28A2O43868 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC28A2O43868 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC28A2O43868 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLC28A2O43868 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 AP000523.1-201ENST00000398242 1049 ntBASIC17.66■□□□□ 0.42
SLC28A2O43868 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC28A2O43868 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC28A2O43868 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC28A2O43868 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC28A2O43868 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC28A2O43868 AC079776.4-201ENST00000511039 504 ntBASIC17.66■□□□□ 0.42
SLC28A2O43868 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC28A2O43868 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC28A2O43868 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC28A2O43868 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 AC090164.3-201ENST00000610780 2143 ntBASIC17.66■□□□□ 0.42
SLC28A2O43868 ANO7L1-203ENST00000602586 1720 ntBASIC17.66■□□□□ 0.42
SLC28A2O43868 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC28A2O43868 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A2O43868 AC005082.1-201ENST00000413042 2259 ntBASIC17.65■□□□□ 0.42
SLC28A2O43868 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC28A2O43868 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC28A2O43868 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC28A2O43868 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 IFNL4P1-201ENST00000607083 540 ntBASIC17.65■□□□□ 0.42
SLC28A2O43868 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC28A2O43868 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
SLC28A2O43868 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A2O43868 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A2O43868 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A2O43868 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A2O43868 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
SLC28A2O43868 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A2O43868 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
SLC28A2O43868 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.64■□□□□ 0.41
SLC28A2O43868 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A2O43868 Z85996.1-201ENST00000494644 937 ntBASIC17.64■□□□□ 0.41
SLC28A2O43868 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A2O43868 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SLC28A2O43868 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC28A2O43868 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC28A2O43868 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A2O43868 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A2O43868 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A2O43868 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SLC28A2O43868 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SLC28A2O43868 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A2O43868 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms