Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HDAC3O15379 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.85■□□□□ 0.45
HDAC3O15379 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
HDAC3O15379 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HDAC3O15379 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC3O15379 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC3O15379 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.85■□□□□ 0.45
HDAC3O15379 AC108860.2-201ENST00000562760 2183 ntBASIC17.85■□□□□ 0.45
HDAC3O15379 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.85■□□□□ 0.45
HDAC3O15379 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
HDAC3O15379 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC3O15379 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.85■□□□□ 0.45
HDAC3O15379 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDAC3O15379 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.84■□□□□ 0.45
HDAC3O15379 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 RNA5SP413-201ENST00000516373 109 ntBASIC17.84■□□□□ 0.45
HDAC3O15379 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.84■□□□□ 0.45
HDAC3O15379 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDAC3O15379 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.84■□□□□ 0.45
HDAC3O15379 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
HDAC3O15379 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDAC3O15379 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDAC3O15379 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.84■□□□□ 0.45
HDAC3O15379 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC3O15379 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.83■□□□□ 0.45
HDAC3O15379 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
HDAC3O15379 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.83■□□□□ 0.45
HDAC3O15379 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC3O15379 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.83■□□□□ 0.45
HDAC3O15379 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HDAC3O15379 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.83■□□□□ 0.44
HDAC3O15379 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HDAC3O15379 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HDAC3O15379 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 AL023284.2-201ENST00000405850 579 ntBASIC17.83■□□□□ 0.44
HDAC3O15379 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 MCCD1P1-208ENST00000445732 328 ntBASIC17.83■□□□□ 0.44
HDAC3O15379 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
HDAC3O15379 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.83■□□□□ 0.44
HDAC3O15379 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
HDAC3O15379 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
HDAC3O15379 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.83■□□□□ 0.44
HDAC3O15379 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HDAC3O15379 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
HDAC3O15379 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDAC3O15379 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC3O15379 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
HDAC3O15379 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC3O15379 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDAC3O15379 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.82■□□□□ 0.44
HDAC3O15379 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HDAC3O15379 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms