Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SOX1O00570 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
SOX1O00570 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.42■□□□□ 0.7
SOX1O00570 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.42■□□□□ 0.7
SOX1O00570 TFAMP1-201ENST00000412727 736 ntBASIC19.42■□□□□ 0.7
SOX1O00570 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 FAM58CP-201ENST00000435741 640 ntBASIC19.42■□□□□ 0.7
SOX1O00570 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.42■□□□□ 0.7
SOX1O00570 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.42■□□□□ 0.7
SOX1O00570 MIR4751-201ENST00000578027 74 ntBASIC19.42■□□□□ 0.7
SOX1O00570 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SOX1O00570 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SOX1O00570 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
SOX1O00570 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SOX1O00570 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SOX1O00570 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SOX1O00570 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SOX1O00570 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX1O00570 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
SOX1O00570 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.41■□□□□ 0.7
SOX1O00570 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.41■□□□□ 0.7
SOX1O00570 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.41■□□□□ 0.7
SOX1O00570 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX1O00570 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.41■□□□□ 0.7
SOX1O00570 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.41■□□□□ 0.7
SOX1O00570 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.41■□□□□ 0.7
SOX1O00570 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.41■□□□□ 0.7
SOX1O00570 LINC00628-201ENST00000628516 1289 ntBASIC19.41■□□□□ 0.7
SOX1O00570 AL022326.1-202ENST00000641533 845 ntBASIC19.41■□□□□ 0.7
SOX1O00570 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.41■□□□□ 0.7
SOX1O00570 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.41■□□□□ 0.7
SOX1O00570 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SOX1O00570 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SOX1O00570 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
SOX1O00570 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 AP002414.1-201ENST00000391405 1147 ntBASIC19.4■□□□□ 0.7
SOX1O00570 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.4■□□□□ 0.7
SOX1O00570 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.4■□□□□ 0.7
SOX1O00570 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.4■□□□□ 0.7
SOX1O00570 MTCL1P1-201ENST00000446207 792 ntBASIC19.4■□□□□ 0.7
SOX1O00570 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX1O00570 TSPY16P-201ENST00000449843 468 ntBASIC19.4■□□□□ 0.7
SOX1O00570 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SOX1O00570 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SOX1O00570 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX1O00570 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SOX1O00570 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX1O00570 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.4■□□□□ 0.7
SOX1O00570 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SOX1O00570 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SOX1O00570 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
SOX1O00570 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SOX1O00570 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.39■□□□□ 0.7
SOX1O00570 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
SOX1O00570 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SOX1O00570 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SOX1O00570 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SOX1O00570 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SOX1O00570 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SOX1O00570 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.39■□□□□ 0.7
SOX1O00570 AC004817.3-201ENST00000602957 2129 ntBASIC19.39■□□□□ 0.69
SOX1O00570 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX1O00570 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.39■□□□□ 0.69
SOX1O00570 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX1O00570 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.39■□□□□ 0.69
SOX1O00570 UGT1A2P-201ENST00000454886 866 ntBASIC19.39■□□□□ 0.69
SOX1O00570 AC108073.2-201ENST00000464002 357 ntBASIC19.39■□□□□ 0.69
SOX1O00570 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.39■□□□□ 0.69
SOX1O00570 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.39■□□□□ 0.69
SOX1O00570 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.39■□□□□ 0.69
SOX1O00570 AC084346.2-201ENST00000607097 949 ntBASIC19.39■□□□□ 0.69
SOX1O00570 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SOX1O00570 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SOX1O00570 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms