Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 AC010240.3-201ENST00000607688 395 ntBASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
COL4A3BPQ9Y5P4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL4A3BPQ9Y5P4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL4A3BPQ9Y5P4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.52■□□□□ 0.87
COL4A3BPQ9Y5P4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
COL4A3BPQ9Y5P4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL4A3BPQ9Y5P4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL4A3BPQ9Y5P4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 AC116407.4-201ENST00000623319 1061 ntBASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.51■□□□□ 0.87
COL4A3BPQ9Y5P4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AC020763.4-201ENST00000623414 4170 ntBASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 BICD1-207ENST00000551848 1962 ntBASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AC079602.3-201ENST00000623931 403 ntBASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL4A3BPQ9Y5P4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL4A3BPQ9Y5P4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms